Job Description P0AFI2 Confidence 15.09% Date Thu Jan 5 11:26:24 GMT 2012 Rank 87 Aligned Residues 50 % Identity 12% Template c1dpuA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:replication protein a (rpa32) c-terminal domain; PDBTitle: solution structure of the c-terminal domain of human rpa322 complexed with ung2(73-88) Resolution UNK

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	L	K	P	V	Q	R	R	I	V	Y	A	M	S	E	L	G	L	N	A	S	A	K	F	K	K	S	A	R	T	V	G	D	V	L	G	K	Y	H	P	H	G	D	S	A	C	Y	E	A	M	V	L	M	A	Q	P
Query Conservation
Alig confidence																								.	.	.													.	.	.	.
Template Conservation																								.	.	.													.	.	.	.
Template Sequence		N	G	L	T	V	A	Q	N	Q	V	L	N	L	I	K	A	C	P	R	P	E	G	.	.	.	L	N	F	Q	D	L	K	N	Q	L	K	H	.	.	.	.	M	S	V	S	S	I	K	Q	A	V	D	F	L	S	N	E
Template Known Secondary structure				S																	T	T	T	.	.	.										S	T	T	.	.	.	.	S															T
Template Predicted Secondary structure																								.	.	.													.	.	.	.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.				.	.	.	.	.	230	.	.	.	.	.	.					.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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