Job Description P0AFI2 Confidence 33.59% Date Thu Jan 5 11:26:24 GMT 2012 Rank 34 Aligned Residues 111 % Identity 10% Template c1bpoA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:protein (clathrin); PDBTitle: clathrin heavy-chain terminal domain and linker Resolution 2.60 Å

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		542	.	.	.	.	.	.	.	550	.	.		.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570							.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.
Predicted Secondary structure													.																			.	.	.	.	.	.
Query SS confidence													.																			.	.	.	.	.	.
Query Sequence		P	V	V	F	V	D	S	T	G	R	S	.	Y	A	I	D	P	I	T	L	P	S	A	R	G	Q	G	E	P	L	.	.	.	.	.	.	T	G	K	L	T	L	P	P	G	A	T	V	D	H	M	L	M	E	S	D	D	Q	K	L	L	M	A	S	D	A	G	Y	G	F	V	C	T	F	N	D	L	V	A	R
Query Conservation													.																			.	.	.	.	.	.
Alig confidence													.																			.	.	.	.	.	.																																								.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		T	L	F	C	F	A	V	R	G	Q	A	G	G	K	L	H	I	I	E	V	G	T	P	P	T	G	N	Q	P	F	P	K	K	A	V	D	V	F	F	P	P	E	A	Q	N	D	F	P	V	A	M	Q	I	S	E	K	H	D	V	V	F	L	I	T	K	Y	G	Y	I	H	L	Y	D	L	E	.	.	.	.	.
Template Known Secondary structure										S	T	T										S				T	T															T	T	S	T	T										T	T	T	T							T	T	S							T	T	.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		615	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	A	G	K	A	L	I	T	L	P	E	N	A	H	V	M	P	P	V	V	I	E	D	A	S	D	M	L	L	A	I	T	Q	A	G	R	M	L	M	F	P	V	S	D
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	T	G	T	C	I	Y	M	N	R	I	S	G	E	T	I	F	V	T	A	P	H	E	A	T	A	G	I	I	G	V	N	R	K	G	Q	V	L	S	V	C	V	E	E
Template Known Secondary structure		.	.	T											S	S									T	T	T	T							T	T										T
Template Predicted Secondary structure		.	.
Template SS confidence
				289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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