Job Description P0AB38 Confidence 11.81% Date Thu Jan 5 11:14:32 GMT 2012 Rank 9 Aligned Residues 91 % Identity 19% Template c3gr1A_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:protein prgh; PDBTitle: periplamic domain of the t3ss inner membrane protein prgh2 from s.typhimurium (fragment 170-392) Resolution 2.80 Å

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		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																																				.	.															.
Query SS confidence																																				.	.															.
Query Sequence		G	V	T	A	G	S	V	L	L	V	D	S	V	N	N	R	T	N	G	S	L	N	A	A	E	A	T	E	T	L	R	N	A	L	.	.	A	N	N	G	K	F	T	L	V	S	A	Q	Q	L	.	S	M	A	K	Q	Q	L	G	L	S	P	Q	D	S	L	G	T	R	S	K	A	I	G	I	A	R	N	V	G
Query Conservation																																				.	.															.
Alig confidence														.																						.	.															.						.	.																	.	.	.	.	.
Template Conservation														.																																												.	.																	.	.	.	.	.
Template Sequence		D	E	P	R	K	P	V	F	W	L	S	R	.	Q	R	N	T	M	S	K	K	E	L	E	V	L	S	Q	K	L	R	A	L	M	P	Y	A	D	S	V	N	I	T	L	M	D	D	V	T	A	A	G	Q	A	E	A	.	.	G	L	K	Q	Q	A	L	P	Y	S	R	R	N	H	K	G	.	.	.	.	.	G
Template Known Secondary structure		S	S	T	T	S							T	.	T	T																				T	T		S																			.	.					T	T									T	T	.	.	.	.	.
Template Predicted Secondary structure														.																																												.	.																	.	.	.	.	.
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.		.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.			.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.						.
		173	.	.	.	.	.	.	180	.																	.	.	.	.	.		.	.	.	190	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Query Sequence		A	H	Y	V	L	Y	S	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	N	V	N	.	A	P	T	L	Q	M	Q	L
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Template Conservation
Template Sequence		V	T	F	V	I	Q	G	A	L	D	D	V	E	I	L	R	A	R	Q	F	V	D	S	Y	Y	R	T	W	G	G	R	Y	V	Q	F	A	I	E	L
Template Known Secondary structure								S																							S	S	S
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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