Job Description P31553 Confidence 2.13% Date Thu Jan 5 11:48:16 GMT 2012 Rank 88 Aligned Residues 166 % Identity 11% Template c3mkuA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:multi antimicrobial extrusion protein (na(+)/drug PDBTitle: structure of a cation-bound multidrug and toxin compound extrusion2 (mate) transporter Resolution 4.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	N	E	K	R	K	T	G	I	E	P	K	V	F	F	P	P	L	I	I	V	G	I	L	C	W	L	T	V	R	D	L	D	A	A	N	V	V	I	N	A	V	F	S	Y	V	T	N	V	W	G	W	A	F	E	W	Y	M	V	V	M	L	F	G	W	F	W	L	V	F	G	P	Y	A	K	K	R	L	G
Query Conservation
Alig confidence																																																															.	.	.
Template Conservation																																																															.	.	.
Template Sequence		V	H	R	Y	K	K	E	A	S	N	L	I	K	L	A	T	P	V	L	I	A	S	V	A	Q	T	G	M	G	F	V	D	T	I	M	A	G	G	V	S	A	I	D	M	A	A	V	S	I	A	A	S	I	W	L	P	S	I	L	F	G	.	.	.	V	G	L	L	M	A	L	V	P	V	V	A	Q	L	N	G
Template Known Secondary structure																																									T	T	T	T	T	T																	.	.	.								G	G	G		T	T	S		S
Template Predicted Secondary structure																																																															.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.				.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
			81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure		.																								.	.
Query SS confidence		.																								.	.
Query Sequence		.	N	E	P	P	E	F	S	T	A	S	W	I	F	M	M	F	A	S	C	T	S	A	A	.	.	V	L	F	W	G	S	I	E	I	Y	Y	Y	I	S	T	P	P	F	G	L	E	P	N	S	T	G	A	K	E	L	G	L	A	Y	S	L	F	H	W	G	P	L	P	W	A	T	Y	S	F	L	S	V	A	F
Query Conservation		.																								.	.
Alig confidence		.																								.	.																			.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.
Template Sequence		A	G	R	Q	H	K	I	P	F	E	V	H	Q	G	L	I	L	A	L	L	V	S	V	P	I	I	A	V	L	F	Q	T	Q	F	I	I	R	F	M	D	V	E	E	A	.	.	.	.	.	.	.	.	.	.	M	A	T	K	T	V	G	Y	M	H	A	V	I	F	A	V	P	A	Y	L	L	F	Q	A	L	R
Template Known Secondary structure		S	S	S	S	S	S																															S	S		S	S	T	T		.	.	.	.	.	.	.	.	.	.																										T
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.											.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	F	F	F	V	R	K	M	E	V	I	R	P	S	S	T	L	V	P	L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	F	T	D	G	M	S	L	T	K	P	A	M	V	I	G	F	I	G	L	L	L
Template Known Secondary structure		T	T	T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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