Job Description P31553 Confidence 3.50% Date Thu Jan 5 11:48:16 GMT 2012 Rank 35 Aligned Residues 107 % Identity 17% Template c1p7bB_ PDB info PDB header:metal transport Chain: B: PDB Molecule:integral membrane channel and cytosolic domains; PDBTitle: crystal structure of an inward rectifier potassium channel Resolution 3.65 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.				.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.							.
Query SS confidence																																				.	.	.							.
Query Sequence		N	A	V	F	S	Y	V	T	N	V	W	G	W	A	F	E	W	Y	M	V	V	M	L	F	G	W	F	W	L	V	F	G	P	Y	.	.	.	A	K	K	R	L	G	.	N	E	P	P	E	F	S	T	A	S	W	I	F	M	M	F	A	S	C	T	S	A	A	V	L	F	W	G	S	I	E	I	Y	Y	Y	I
Query Conservation																																				.	.	.							.
Alig confidence										.																										.	.	.							.																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.																																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	D	L	Y	Y	W	A	L	.	K	V	S	W	P	V	F	F	A	S	L	A	A	L	F	V	V	N	N	T	L	F	A	L	L	Y	Q	L	G	D	A	P	I	A	N	Q	S	P	P	G	F	V	G	A	F	F	F	S	V	E	T	L	A	T	V	G	Y	G	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										.		S																						T	T	T	S	S	S	S	S					S	S	S	S	S	T								T	T	T	T	T	T				S	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.																																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		49	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	P	P	F	G	L	E	P	N	S	T	G	A	K	E	L	G	L	A	Y	S	L	F	H	W	G	P	L	P	W	A	T	Y	S	F	L	S	V	A	F	A	Y	F	F	F	V	R	K	M	E	V	I	R	P	S
Query Conservation
Alig confidence		.	.	.	.	.																													.	.	.	.									.	.
Template Conservation		.	.	.	.	.																													.	.	.	.									.	.
Template Sequence		.	.	.	.	.	D	M	H	P	Q	T	V	Y	A	H	A	I	A	T	L	E	I	F	V	G	M	S	G	I	A	L	S	T	.	.	.	.	G	L	V	F	A	R	F	A	.	.	R	P	R	A	K	I	M	F	A
Template Known Secondary structure		.	.	.	.	.						S																							.	.	.	.								T	.	.	S
Template Predicted Secondary structure		.	.	.	.	.																													.	.	.	.									.	.
Template SS confidence
							115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.					.	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions