Job Description P76464 Confidence 97.92% Date Wed Jan 25 15:21:08 GMT 2012 Rank 21 Aligned Residues 204 % Identity 13% Template d2sqca1 SCOP info alpha/alpha toroid Terpenoid cyclases/Protein prenyltransferases Terpene synthases Resolution 2.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1099	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		R	Q	M	I	Q	D	N	R	L	R	L	M	Q	L	A	G	P	G	A	R	F	T	W	W	G	E	D	G	N	G	D	A	F	L	T	A	W	A	W	Y	A	D	W	Q	A	S	Q	A	I	G	V	T	Q	Q	P	E	Y	W	Q	H	M	L	D	S	Y	A	E	Q	A	D	N	M	P	L	L	H	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence																						.	.	.																							.	.	.	.																												.	.	.	.
Template Conservation																						.	.	.																							.	.	.	.
Template Sequence		A	R	T	L	D	R	A	V	E	Y	L	L	S	C	Q	K	D	E	G	Y	.	.	.	W	W	G	P	L	I	S	P	V	W	D	T	G	L	A	V	L	A	L	R	A	A	.	.	.	.	G	L	P	A	D	H	D	R	L	V	K	A	G	E	W	L	L	D	R	Q	I	T	V	P	G	D	W	A	V	K	R
Template Known Secondary structure																		T	T	S		.	.	.																						T	.	.	.	.	T			T	T														T				S			G	G	G	G	T
Template Predicted Secondary structure																						.	.	.																							.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.				.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.					.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
																								1175	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	L	V	L	A	W	A	Q	E	M	N	L	P	C	K	T	L	L	K	G	L	D	E	A	I	A	R	R	G	T	K	T	E	D	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	N	L	K	P	G	G	F	A	F	Q	F	D	N	V	Y	Y	P	D	V	C	D	T	A	V	V	V	W	A	L	N	T	L	R	L	P	D	E	R	R	R	R	D	A	M	T	K	G	F	R	W	I	V	G	M	Q	S	S	N	G	G	W	G	A	Y	D	V	D	N	T	S	D	L	P	N	H	I	P	F	S
Template Known Secondary structure		T	T	S					B		S	S	S	S		T	T			B												T	T				S																			T			T	T	S		B		S	S		S	S				S	G	G	G	G	S	T	T
Template Predicted Secondary structure
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
										1211	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	S	E	E	D	T	R	D	I	N	D	S	L	I	L	D	T	P	E	S	P	L	A	D	A	V	A	N	V	L	T	M	T	L	L	K	K	A	Q	L	K	S	T	V	M	P	Q	V	Q	Q	Y	A	W	D	K	A	A	N	S	N	Q	P	L	A	H	T	V	V	L	L	N	S	G
Query Conservation		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																																																			.	.	.	.	.
Template Conservation																																																												.	.	.	.	.
Template Sequence		D	F	G	E	V	T	D	P	P	S	E	D	V	T	A	H	V	L	E	C	F	G	S	F	G	Y	D	D	A	W	K	V	I	R	R	A	V	E	Y	L	K	R	E	Q	K	P	D	G	S	W	F	G	R	W	G	V	N	Y	.	.	.	.	.	L	Y	G	T	G	A	V	V	S	A	L	K	A	V	G	I	D
Template Known Secondary structure		S	S	S		S	S				B													T	T	T			T	T	S																T	T	S					S	S	B	S	S		.	.	.	.	.														T	T
Template Predicted Secondary structure																																																												.	.	.	.	.
Template SS confidence
		436	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.						.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510
		1283	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300																									.	.	.	.	.	.	.	.	.	1310	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	D	A	T	Q	T	A	A	I	L	S	G	L	T	A	E	Q	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	I	E	R	A	L	A	M	N	W	L	A	K	Y
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	R	E	P	Y	I	Q	K	A	L	D	W	V	E	Q	H	Q	N	P	D	G	G	W	G	E	D	C	R	S	Y	E	D	P	A	Y	A	G	K	G	A	S	T	P	S	Q	T	A	W	A	L	M	A	L	I	A	G
Template Known Secondary structure		T	T	S													T			T	T	S						G	G	G	G	T		G	G	G	T	T		S	S																T
Template Predicted Secondary structure
Template SS confidence
		511	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions