 |
| Job Description | P76464 | | Confidence | 41.82% | Date | Wed Jan 25 15:21:08 GMT 2012 |
| Rank | 156 | Aligned Residues | 30 |
| % Identity | 27% | Template | d2ahob2 |
| SCOP info | OB-fold
| Nucleic acid-binding proteins
| Cold shock DNA-binding domain-like
|
| Resolution | 3.00 |
|
|   |   |
351 | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
R | P | L | Y | R | A | G | D | R | V | D | V | K | V | I | G | R | E | F | H | D | P | L | H | S | S | P | I | V | S | A | P | A | K | L | S | V | L | D |
| Query Conservation |   |
|   |
|
|
|
|
|
|
|
|   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |   |
|   |   |
|   |   |
|
|
|   |
|
| . | . | . | . | . | . | . | . | . |   |   |   |   |
|
|   |
|
|
|
|
|
| Template Sequence |   |
R | D | V | L | K | E | N | R | K | V | I | V | K | V | I | R | V | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
R | R | K | G | T | V | D | V | S | L | K | K |
| Template Known Secondary structure |   |
 |  |  | T |
| S | S |
|  |  |  |
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | T | T | T | T |  |  |  |  |  | S |
|
|
| Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
55 | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 80 | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|