 |
Job Description | P76464 | Confidence | 94.68% | Date | Wed Jan 25 15:21:08 GMT 2012 |
Rank | 39 | Aligned Residues | 100 |
% Identity | 16% | Template | d1vjja1 |
SCOP info | Immunoglobulin-like beta-sandwich
| E set domains
| Transglutaminase N-terminal domain
|
Resolution | 1.90 |
|
 |
  |   |
338 | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | E | I | Y | N | T | R | L | Y | I | F | T | D | R | P | L | Y | R | A | G | D | R | V | D | V | K | V | I | G | R | E | F | H | D | P | L | H | S | S | P | I | V | S | A | P | A | K | L | S | V | L | D | A | N | G | S | L | L | Q | T | V | N | V | T | L | D | A | R | N | G | G | Q | G | S | F | R | L | P | E | N |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|
|   |
|
|
|   |
|
|
|
|
|
|
|
|   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|   |
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|   |
|   |
|   |
|   |
|   | . |   |   |   |   |
|   |
|   |
|   |   |   | . | . | . | . | . |   |
|
|   |
|
|   |   |   |
|
|   |   |   |   |
|
|   |   |   |   |   |   |   | . |
|   |
|   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |
|
|
|   |
Template Sequence |   |
R | R | G | Q | N | F | Q | V | L | M | I | M | N | K | G | . |
L | G | S | N | E | R | L | E | F | I | V | S | . |
. |
. |
. |
. |
T | G | P | Y | P | S | E | S | A | M | T | K | A | V | F | P | L | S | N | G | S | S | G | G | . |
W | S | A | V | L | Q | A | S | N | G | N | T | L | T | I | S | I | S | S | P | A | S |
Template Known Secondary structure |   |
 | T | T | S |
|  |  |  |  |  |  |  | S | S |
| . |
|
| T | T |
|  |  |  |  |  |  |  | . | . | . | . | . |
| S | S | S |
|
| T | T | T | T | S |  |  |  |  |  |  |  | S | S |
|
| S | S | . | S |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |
|
| T | T |
Template Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |  |  |  |
|
|
| . |
|
|
|
|
|  |  |  |  |  |  |  | . | . | . | . | . |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
| . |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
32 | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | |
. | . | . | 50 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | |
. | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . |
  |
  |   |
418 | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | V | A | G | G | Y | E | L | R | L | A | Y | R | N | Q | V | Y | S | S | S | F | R | V | A | N | Y | I |
Query Conservation |   |
|   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
A | P | I | G | R | Y | T | M | A | L | Q | I | F | S | Q | G | G | I | S | S | V | K | L | G | T | F | I |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
105 | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|