 |
Job Description | P76464 | Confidence | 55.28% | Date | Wed Jan 25 15:21:08 GMT 2012 |
Rank | 137 | Aligned Residues | 88 |
% Identity | 18% | Template | d1ut9a2 |
SCOP info | Immunoglobulin-like beta-sandwich
| E set domains
| E-set domains of sugar-utilizing enzymes
|
Resolution | 2.1 |
|
 |
  |   |
355 | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | |
|
. | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | |
|
|
|
. | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | |
. | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
| . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  | . |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
Query Sequence |   |
R | A | G | D | R | V | D | V | K | V | I | G | R | E | F | H | D | P | L | H | S | S | P | . |
. |
I | V | S | A | P | A | K | L | S | V | L | D | A | N | G | S | L | L | Q | T | V | N | V | T | L | . |
. |
. |
. |
D | A | R | N | G | G | Q | G | S | F | R | L | P | E | N | A | V | A | G | G | . |
Y | E | L | R | L |
Query Conservation |   |
|
|
|
|
|
|   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |
|
|   |
|   |
|   |
|
|   |
|   |   |
|   |   |   |   |   |   |   | . | . | . | . |   |   |   |
|   |   |   |   |   |
|   |
|
|   |   |
|   |   |
|   | . |
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |
|   |
|
|
|
|
|
|   |
|   |   |   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|
|
|   |   |   |   |
|
|   |
|
|   |
|   |
|
Template Sequence |   |
L | P | Q | P | D | V | R | V | N | Q | V | G | Y | L | P | E | G | K | K | V | A | T | V | V | C | N | S | T | Q | P | V | K | W | Q | L | K | N | A | A | G | V | V | V | L | E | G | Y | T | E | P | K | G | L | D | K | D | S | Q | D | Y | V | H | W | L | D | F | S | D | F | A | T | E | G | I | G | Y | Y | F | E | L |
Template Known Secondary structure |   |
|
|
|
| S |  |  |
|
| S | S |  |  |
| S | S | S |
|
|  |  |  |  |  |
|
|
| S | S |
|
|  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |
|  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  |  |
| T | T |
|
|
|
|  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
209 | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . |
  |
  |   |
|
|
428 | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . |
Predicted Secondary structure |   |
. | . |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
A | Y | R | N | Q | V | Y | S | S | S | F | R | V | A | N |
Query Conservation |   |
. | . |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|
Alig confidence |   |
. | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|   |   |   |
|   |
|
|   |
|   |   |
Template Sequence |   |
P | T | V | N | S | P | T | N | Y | S | H | P | F | D | I | R | K |
Template Known Secondary structure |   |
T | T |
|
| S | T | T |
| B | B |
|
|  |  |  |
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |
|  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
289 | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|