Job Description P76464 Confidence 71.02% Date Wed Jan 25 15:21:08 GMT 2012 Rank 126 Aligned Residues 101 % Identity 18% Template d1tfpa_ SCOP info Prealbumin-like Transthyretin (synonym: prealbumin) Transthyretin (synonym: prealbumin) Resolution 2.90

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		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		V	K	V	I	G	R	E	F	H	D	P	L	H	S	S	P	I	V	S	A	P	A	K	L	S	V	L	D	A	N	G	S	L	L	Q	T	V	N	V	T	L	D	A	R	N	G	G	Q	G	S	F	R	L	P	E	N	A	V	A	G	G	Y	E	L	R	L	A	Y	R	N	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.																																								.																					.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.																																								.
Template Sequence		L	M	V	K	V	L	D	.	.	.	A	V	R	G	S	P	A	A	N	V	A	V	K	V	F	K	K	A	A	D	G	T	W	Q	D	F	A	T	G	K	T	T	E	F	G	E	I	H	E	.	L	T	T	E	E	Q	F	V	E	G	V	Y	R	V	E	F	D	T	S	S	Y	W	K	G	L	G	L	S	P	F
Template Known Secondary structure									.	.	.	T	T	T	T					S										T	T	S												T	T	S			S		.	S	S		T	T	T			S										T	T	T	T	G	G	G	T			T	T
Template Predicted Secondary structure									.	.	.																																								.
Template SS confidence
		12	.	.	.	.	.	.				.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
			432	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	Q	V	Y	S	S	S	F	R	V	A	N	Y	I	K	P	H	F	E	I	G	L	A	L	A	K	K	E	F	K	T	G	E	A	V	S
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		H	E	Y	A	D	V	V	F	T	A	N	D	S	G	H	R	H	Y	T	I	A	A	L	L	S	P	F	S	Y	S	T	T	A	V	V	S
Template Known Secondary structure													S	S	S												S	S
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions