Job Description P76464 Confidence 99.94% Date Wed Jan 25 15:21:08 GMT 2012 Rank 14 Aligned Residues 234 % Identity 12% Template d1qqfa_ SCOP info alpha/alpha toroid Terpenoid cyclases/Protein prenyltransferases Complement components Resolution 1.45

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		1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.							.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.
Query Sequence		V	I	N	T	G	S	R	L	I	P	L	S	L	A	W	R	S	L	A	D	H	Q	S	A	A	A	.	.	.	.	.	.	N	D	I	R	Q	M	I	Q	D	N	R	L	R	L	M	Q	L	A	G	P	G	A	R	F	T	W	W	G	E	D	G	N	G	D	A	F	L	T	A	W	A	W	Y	A	D	W	Q	A
Query Conservation																												.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.																															.																	.
Template Conservation																																																																.																	.
Template Sequence		G	E	Q	N	M	I	G	M	T	P	T	V	I	A	V	H	Y	L	D	Q	T	E	Q	W	E	K	F	G	L	E	K	R	Q	E	A	L	E	L	I	K	K	G	Y	T	Q	Q	L	A	F	K	Q	P	I	S	A	Y	A	A	F	N	N	R	.	P	P	S	T	W	L	T	A	Y	V	S	R	V	F	S	L	.
Template Known Secondary structure																							T							G	G	G																	T	T	B		T	T	S		B		S	S	T	T	S	.																	.
Template Predicted Secondary structure																																																																.																	.
Template SS confidence
		1011	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.		.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.
		1144	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170																										.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.					.	.	.	1190	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Query Sequence		S	Q	A	I	G	V	T	Q	Q	P	E	Y	W	Q	H	M	L	D	S	Y	A	E	Q	A	D	N	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	L	H	R	A	L	V	L	A	W	A	Q	E	M	N	.	.	.	.	L	P	C	K	T	L	L	K
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Alig confidence								.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template Conservation								.
Template Sequence		A	A	N	L	I	A	.	I	D	S	Q	V	L	C	G	A	V	K	W	L	I	L	E	K	Q	K	P	D	G	V	F	Q	E	D	G	P	V	I	H	Q	E	M	I	G	G	F	R	N	T	K	E	A	D	V	S	L	T	A	F	V	L	I	A	L	Q	E	A	R	D	I	C	E	G	Q	V	N	S	L	P	G
Template Known Secondary structure			T	T	T	S		.																		B		T	T	S		B			S	S			S		G	G	G	G	G	G	G	G	S		T	T																					T	T	T		T	T
Template Predicted Secondary structure								.
Template SS confidence
		1089	1090	.	.	.	.		.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.
		1195	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	D	E	A	I	A	R	R	G	T	K	T	E	D	F	S	E	E	D	T	R	D	I	N	D	S	L	I	L	D	T	P	E	S	P	L	A	D	A	V	A	N	V	L	T	M	T	L	L	K	K	A	Q	L	K	S	T	V	M	P	Q	V	Q	Q	Y	A	W	D	K	A	A	N	S	N	Q	P	L	A	H
Query Conservation
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	I	N	K	A	G	E	Y	L	E	A	S	Y	L	N	L	Q	R	P	Y	T	V	A	I	A	G	Y	A	L	A	L	M	N	K	L	E	E	P	Y	L	T	K	F	L	N	T	A	K	D	.	.	.	.	.	.	.	.	.	.	.	.	R	N	R	W	E	E	P	G	Q	Q	L	Y	N	V	E	A	T	S	Y
Template Known Secondary structure															T	T																	T	T				T	T									S	B	T	.	.	.	.	.	.	.	.	.	.	.	.	T	T	B				T	T
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1168	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.													.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.
		1275	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.								.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.
Query Sequence		T	V	V	L	L	N	S	G	G	D	A	T	Q	T	A	A	I	L	S	G	L	.	.	.	.	.	.	.	T	A	E	Q	S	T	I	E	R	A	L	A	M	N	W	L	A	K	Y	M	A	T	M
Query Conservation																							.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	L	L	A	L	L	L	L	K	D	F	D	S	V	P	P	V	V	R	W	L	N	D	E	R	Y	Y	G	G	G	Y	G	S	T	Q	A	T	F	M	V	F	Q	A	L	A	Q	Y	R	A	D	V
Template Known Secondary structure									T	T		T	T	S															T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		1236	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions