Job Description P76464 Confidence 30.72% Date Wed Jan 25 15:21:08 GMT 2012 Rank 174 Aligned Residues 71 % Identity 28% Template c3kdvB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:dna damage response b protein; PDBTitle: crystal structure of dna damage response b (ddrb) from deinococcus2 geothermalis Resolution 2.80 Å

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		42	.	.	.	.	.	.	.	50					.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.
Query SS confidence											.	.	.	.
Query Sequence		L	P	S	S	N	Y	A	P	P	.	.	.	.	A	G	G	T	F	F	L	L	A	D	S	S	F	S	S	S	E	E	A	K	V	R	L	E	A	P	G	R	D	Y	R	R	Y	Q	M	E	E	Y	G	G	V	D	V	R	L	Y	R	I	P	D	P	M	A	F	L	R	Q	Q	K	N	L	H	R	I	V	V	Q
Query Conservation											.	.	.	.
Alig confidence											.	.	.	.																										.											.	.	.	.
Template Conservation																																								.											.	.	.	.
Template Sequence		V	P	V	G	G	Y	Q	F	P	L	E	N	E	P	D	F	D	W	S	L	I	G	A	R	K	W	T	N	P	E	G	E	E	X	I	L	H	R	.	G	H	A	Y	R	R	R	E	L	E	.	.	.	.	V	D	S	R	K	X	K	L	P	A	A	V	K	Y	S	R	G	A	K	N	T	D	P	E	H	V	R
Template Known Secondary structure				T	T				B		S	T	T	G	G	G	B		G	G	G	G	T							S	S	S							T	.	T										.	.	.	.											S	S			S	S	S	S								S	S
Template Predicted Secondary structure																																								.											.	.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.					.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions