Job Description P76464 Confidence 99.95% Date Wed Jan 25 15:21:08 GMT 2012 Rank 12 Aligned Residues 188 % Identity 15% Template c3hs0B_ PDB info PDB header:immune system Chain: B: PDB Molecule:cobra venom factor; PDBTitle: cobra venom factor (cvf) in complex with human factor b Resolution 3.00 Å

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		864	.	.	.	.	.	870	.	.	.	.	.						.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.		.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.																																										.
Query SS confidence														.	.	.	.	.																																										.
Query Sequence		P	R	R	E	E	V	D	T	A	A	W	M	.	.	.	.	.	P	S	L	T	T	D	K	Q	G	K	A	Y	F	T	F	L	M	P	D	S	L	T	R	W	R	I	T	A	R	G	M	N	G	D	G	L	V	G	Q	G	R	.	A	Y	L	R	S	E	K	N	L	Y	M	K	W	S	M	P	T	V	Y	R	V
Query Conservation														.	.	.	.	.																																										.
Alig confidence														.	.	.	.	.																																										.
Template Conservation
Template Sequence		S	R	S	D	F	P	K	S	W	L	W	L	T	K	D	L	T	E	E	P	N	S	Q	G	I	S	S	K	T	M	S	F	Y	L	R	D	S	I	T	T	W	V	V	L	A	V	S	F	T	P	T	K	G	I	C	V	A	E	P	Y	E	I	R	V	M	K	V	F	F	I	D	L	Q	M	P	Y	S	V	V	K
Template Known Secondary structure			B					S	S										S				T	T	S												S			S											T	T	T															S									S				T
Template Predicted Secondary structure
Template SS confidence
		725	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.
		938	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.											.	.	970	.	.	.	.	.	.		.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.				.	1000	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.										.																							.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.										.																							.	.	.
Query Sequence		G	D	K	P	A	A	G	L	F	I	F	S	Q	Q	D	N	E	P	V	A	L	V	T	K	F	A	G	A	E	M	.	.	.	.	.	.	.	.	.	.	R	Q	T	L	T	L	H	K	G	.	A	N	Y	I	S	L	T	Q	N	I	Q	Q	S	G	L	L	S	A	E	L	Q	Q	.	.	.	N	G	Q	V	Q
Query Conservation																																.	.	.	.	.	.	.	.	.	.										.																							.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.										.																							.	.	.
Template Conservation
Template Sequence		N	E	Q	V	E	I	R	A	I	L	H	N	Y	V	N	E	D	I	Y	V	R	V	E	L	L	Y	N	P	A	F	C	S	A	S	T	K	G	Q	R	Y	R	Q	Q	F	P	I	K	A	L	S	S	R	A	V	P	F	V	I	V	P	L	E	Q	G	L	H	D	V	E	I	K	A	S	V	Q	E	A	L	W	S
Template Known Secondary structure		T													S	S	S												T	T			S	S			S	S	S										S	S													S	S												T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		805	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.
		1004	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.																.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	S	I	S	T	K	L	S	F	V	D	N	S	W	P	V	E	Q	Q	K	N	V	M	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	D	N	A	L	M	L	P	E	Q	A	S	N	I	R	L	Q	S	S	E	T	P
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	G	V	R	K	K	L	K	V	V	P	E	G	V	Q	K	S	I	V	T	I	V	K	L	D	P	R	A	K	G	V	G	G	T	Q	L	E	V	I	K	A	R	K	L	D	D	R	V	P	D	T	E	I	E	T	K	I	I	I	Q	G	D	P
Template Known Secondary structure													S	S																		S	S	S												T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		885	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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