Return to main results Retrieve Phyre Job Id

Job DescriptionP76464
Confidence27.41%DateWed Jan 25 15:21:08 GMT 2012
Rank185Aligned Residues78
% Identity13%Templatec2xetB_
PDB info PDB header:transport proteinChain: B: PDB Molecule:f1 capsule-anchoring protein; PDBTitle: conserved hydrophobic clusters on the surface of the caf1a usher2 c-terminal domain are important for f1 antigen assembly
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   270.........280... ......290.........300.........310.........320.........330.........340........
Predicted Secondary structure 







.





























Query SS confidence 













.
































































Query Sequence  LVWTAGKKQGEAKP. GSEILWTDGLGVMTRGVTDDSGTLQLQHISPERSYILGKDAEGGVFVSENFFYESEIYNTRLYIF
Query Conservation 

 
  
 

 

 .

 
       

    

  
 
                                      

 
Alig confidence 













.













..
















































Template Conservation 


 
   

  




 
     
   
.. 

  
 


 
    
 
 
 

      
   
 
        
   
Template Sequence  LFLHLKRSDNKPVPFGSIVTIEGQSSSSG. . IVGDNSGVYLTGLPKKSKILVKWGRDKNQSCSSNVVLPEKTDISGAYRL
Template Known Secondary structure  TTS
B

TT
TTSSS

..

TTS
S

SS
SSTTS

S

S

S
Template Predicted Secondary structure 














..























Template SS confidence 















































































   726...730.........740.........750.... .....760.........770.........780.........790.........800...
 
   349
Predicted Secondary structure 
Query SS confidence 
Query Sequence  T
Query Conservation 
Alig confidence 
Template Conservation   
Template Sequence  S
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   804
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions