Job Description P76464 Confidence 96.35% Date Wed Jan 25 15:21:08 GMT 2012 Rank 29 Aligned Residues 242 % Identity 11% Template c1wlhA_ PDB info PDB header:structural protein Chain: A: PDB Molecule:gelation factor; PDBTitle: molecular structure of the rod domain of dictyostelium2 filamin Resolution 2.80 Å

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		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	R	V	D	V	K	V	I	G	R	E	F	H	D	P	L	H	S	S	P	I	V	S	A	P	A	K	L	S	V	L	D	A	N	G	S	L	L	Q	T	V	N	V	T	L	D	A	R	N	G	G	Q	G	S	F	R	L	P	E	N	A	V	A	G	G	Y	E	L	R	L	A	Y	R	N	Q	V	Y	S	S
Query Conservation
Alig confidence																		.	.	.	.	.																			.	.	.																.					.	.
Template Conservation																		.	.	.	.	.																			.	.	.																.					.	.
Template Sequence		F	Q	P	S	K	F	K	I	H	A	V	D	P	D	G	V	.	.	.	.	.	D	G	G	D	G	F	V	V	T	I	E	G	P	A	P	V	D	P	.	.	.	V	M	V	D	N	G	D	G	T	Y	D	V	E	F	E	.	P	K	E	A	.	.	G	D	Y	V	I	N	L	T	L	D	G	D	N	V	N	G
Template Known Secondary structure		T	S										S	S	S			.	.	.	.	.												S	S	S					.	.	.	B					S	S	S								.			S		.	.	S									S	S	S	B		T	T
Template Predicted Secondary structure																		.	.	.	.	.																			.	.	.																.					.	.
Template SS confidence
		567	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.						.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600				.	.	.	.	.	.	.	.	.	610	.	.	.	.	.		.	.	.	.			620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.
		437				.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.
Predicted Secondary structure			.	.	.
Query SS confidence			.	.	.
Query Sequence		S	.	.	.	F	R	V	A	N	Y	I	K	P	H	F	E	I	G	L	A	L	A	K	K	E	F	K	T	G	E	A	V	S	G	K	L	Q	L	L	Y	P	D	G	E	P	V	K	N	A	R	V	Q	L	S	L	R	A	Q	Q	L	S	M	V	G	N	D	L	R	Y	A	G	R	F	P	V	S	L	E	G	S
Query Conservation			.	.	.
Alig confidence			.	.	.																																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	P	K	T	V	T	V	K	P	A	P	S	A	E	H	S	Y	A	E	G	E	G	L	V	K	V	F	D	N	A	P	A	E	F	T	I	F	A	V	D	T	K	G	V	A	R	T	D	G	G	D	P	F	E	V	A	I	N	G	P	D	G	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	A
Template Known Secondary structure			S									B		T	T	T					S	G	G	G	T				S	S	S									B	B	S	S	S	S	B		S	S												T	T	S		B	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		639	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.														.	.	.
		514	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.		570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.																				.	.	.	.
Query SS confidence																																																										.																				.	.	.	.
Query Sequence		E	T	V	S	D	A	S	G	H	V	A	L	N	L	P	A	A	D	K	P	S	R	Y	L	L	T	V	S	A	S	D	G	A	A	Y	R	V	T	T	T	K	E	I	L	I	E	R	G	L	A	H	Y	S	L	S	T	.	A	A	Q	Y	S	N	S	G	E	S	V	V	F	R	Y	A	A	L	E	.	.	.	.
Query Conservation																																																										.																				.	.	.	.
Alig confidence																	.																.	.	.	.	.	.	.	.	.	.	.															.																				.	.	.	.
Template Conservation																	.																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	T	D	N	N	D	G	T	Y	G	V	V	Y	D	.	A	P	V	E	G	N	Y	N	V	N	V	T	L	R	G	.	.	.	.	.	.	.	.	.	.	.	N	P	I	K	N	M	P	I	D	V	K	C	I	E	G	A	N	G	E	D	S	S	F	G	S	F	T	F	T	V	A	A	K	N	K	K	G	E
Template Known Secondary structure							T	T	T								.			S	S										T	T	.	.	.	.	.	.	.	.	.	.	.				T	T		S											G	G	G													B		T	T	S	S
Template Predicted Secondary structure																	.																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		706	.	.	.	710	.	.	.	.	.	.	.	.	.	720		.	.	.	.	.	.	.	.	.	730	.	.	.	.	.												.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.
				589	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.		.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.
Predicted Secondary structure		.	.																			.
Query SS confidence		.	.																			.
Query Sequence		.	.	S	S	K	Q	V	P	V	T	Y	E	W	L	R	L	E	D	R	T	.	S	H	S	G	E	L	P	S	G	G	K	S	F	T	V	N	F	A	K	P	G	N	Y	N	L	T	L	R
Query Conservation		.	.																			.
Alig confidence		.	.																			.
Template Conservation
Template Sequence		V	K	T	Y	G	G	D	K	F	E	V	S	I	T	G	P	A	E	E	I	T	L	D	A	I	D	N	Q	D	G	T	Y	T	A	A	Y	S	L	V	G	N	G	R	F	S	T	G	V	K
Template Known Secondary structure		B		S	S			S								S			S										S	S	S											S
Template Predicted Secondary structure
Template SS confidence
		774	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions