Job Description P76464 Confidence 20.34% Date Wed Jan 25 15:21:08 GMT 2012 Rank 208 Aligned Residues 162 % Identity 10% Template c1mq8C_ PDB info PDB header:immune system Chain: C: PDB Molecule:intercellular adhesion molecule-1; PDBTitle: crystal structure of alphal i domain in complex with icam-1 Resolution 3.30 Å

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		449	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	G	L	A	L	A	K	K	E	F	K	T	G	E	A	V	S	G	K	L	Q	L	L	Y	P	D	G	E	P	V	K	N	A	R	V	Q	L	S	L	R	A	Q	Q	L	S	M	V	G	N	D	L	R	Y	A	G	R	F	P	V	S	L	E	G	S	E	T	V	S	D	A	S	G	H	V	A	L	N	L	P
Query Conservation
Alig confidence																										.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	T	S	V	S	P	S	K	V	I	L	P	R	G	G	S	V	L	V	T	C	S	T	S	.	.	.	.	.	C	D	Q	P	K	L	L	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	P	L	P	K	K	E	L	L	L	P	G	N	N	R	K	V	Y	E	L	S
Template Known Secondary structure								S						T	T											.	.	.	.	.		S	S		S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S				B				S		S	S
Template Predicted Secondary structure																										.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.						.	.	.	.	.	30	.	.	.																					.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.
		529	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	D	K	P	S	R	Y	L	L	T	V	S	A	S	D	G	A	A	Y	R	V	T	T	T	K	E	I	L	I	E	R	G	L	A	H	Y	S	L	S	T	A	A	Q	Y	S	N	S	G	E	S	V	V	F	R	Y	A	A	L	E	S	S	K	Q	V	P	V	T	Y	E	W	L	R	L	E	D	R	T	S	H
Query Conservation
Alig confidence															.	.	.
Template Conservation															.	.	.
Template Sequence		N	V	Q	E	D	S	Q	P	M	C	Y	S	N	.	.	.	C	P	D	G	Q	S	T	A	K	T	F	L	T	V	Y	W	T	P	E	R	V	E	L	A	P	L	P	S	W	Q	P	V	G	K	N	L	T	L	R	C	Q	V	E	G	G	A	P	R	A	N	L	T	V	V	L	L	R	G	E	K	E	L	K	R
Template Known Secondary structure		S			S										.	.	.		S	S													B			S				B					S	B			S	S													B	S	T	T	T							S	S	S	S
Template Predicted Secondary structure															.	.	.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.				.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		609	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.					.	.	.	.	.	630	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.
Query SS confidence																		.	.	.	.
Query Sequence		S	G	E	L	P	S	G	G	K	S	F	T	V	N	F	A	.	.	.	.	K	P	G	N	Y	N	L	T	L	R	D	K	D	G
Query Conservation																		.	.	.	.
Alig confidence																		.	.	.	.
Template Conservation
Template Sequence		E	P	A	V	G	E	P	A	E	V	T	T	T	V	L	V	R	R	D	H	H	G	A	N	F	S	C	R	T	E	L	D	L	R
Template Known Secondary structure						B	T	T										S	S	S		S	S												G
Template Predicted Secondary structure
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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