Job Description P67444 Confidence 17.66% Date Thu Jan 5 12:10:37 GMT 2012 Rank 5 Aligned Residues 290 % Identity 12% Template c3orgB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:cmclc; PDBTitle: crystal structure of a eukaryotic clc transporter Resolution 3.50 Å

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		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	Y	L	R	R	V	I	T	P	T	V	S	G	I	V	V	L	M	I	G	L	S	L	I	K	V	G	I	I	D	F	G	G	G	F	A	A	K	S	S	G	T	F	G	N	Y	E	H	L	G	V	G	L	L	V	L	I	V	V	I	G	F	N	C	C	R	S	P	L	L	R	M	G	G	I	A	I	G	L
Query Conservation
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	M	Y	L	L	R	L	V	C	F	L	T	L	L	G	V	T	A	A	L	F	I	F	A	V	D	L	A	V	H	G	L	E	E	L	R	M	K	I	S	R	L	A	G	R	F	A	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	L	Y	V	V	S	G	V	A	L	C	L
Template Known Secondary structure																																												S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.																				.	.	140	.	.	.	.	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270												.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	V	G	Y	I	A	S	L	C	L	G	M	V	D	F	S	S	M	R	N	L	P	L	I	T	I	P	H	P	F	K	Y	G	F	S	F	S	F	H	Q	F	L	V	V	G	T	I	Y	L	L	S	V	.	.	.	.	.	.	.	.	.	.	.	L	E	A	V	G	D	I	T	A	T	A	M	V	S	R	R	P
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	S	T	F	W	C	A	V	L	S	T	E	A	E	G	S	G	L	P	Q	M	K	S	I	L	S	G	F	Y	D	K	M	R	S	A	L	E	L	R	V	L	F	A	K	A	L	G	L	I	C	A	I	G	G	G	L	P	V	G	W	E	G	P	N	V	H	I	A	C	I	I	A	H	Q	F	Y	R	L	G	V
Template Known Secondary structure										S		G	G	G		B		S									T	T	T					G	G	G	G	S																	T	T		S		B	S																T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.		.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		I	Q	G	E	E	Y	Q	S	R	L	K	G	G	V	L	A	D	G	L	V	S	V	I	A	S	A	V	G	S	L	P	L	T	T	F	A	Q	N	N	G	V	I	Q	M	T	G	V	A	S	R	Y	V	G	R	T	I	A	V	M	L	V	I	L	G	L	F	P	M	.	I	G	G	F	F	T	T	I	P	S	A
Query Conservation																																																																						.
Alig confidence																																																																						.
Template Conservation
Template Sequence		F	K	E	L	C	T	D	R	A	L	R	L	Q	T	L	A	A	A	C	A	V	G	L	A	S	S	F	G	A	P	L	G	G	V	L	Y	S	I	E	T	I	A	S	F	Y	L	V	Q	A	F	W	K	G	V	L	S	A	L	S	G	A	I	V	Y	E	L	D	V	S	R	T	Q	T	L	L	Y	A	I	L	G
Template Known Secondary structure		T	T					S																					T													T		S	S			T	T																T	T						S		T
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	G	G	A	M	T	L	M	F	S	M	I	A	I	A	G	I	R	I	I	I	T	N	G	L	K	R	R	E	T	L	I	V	A	T	S	L	G	L	G	L	G	V	S	Y	D	P	E	I	F	K	I	L	P	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.
Template Sequence		A	L	M	G	V	L	G	A	L	F	I	R	C	V	R	S	.	I	Y	E	L	R	M	R	H	Y	P	G	T	N	R	Y	F	L	V	G	V	V	A	L	F	A	S	A	L	Q	Y	P	F	P	R	A	T	I	N	D	L	F	K	A	V	T	E	L	I	L	M	P	I	I	K	F	I	L	V	A	L	S	I	G
Template Known Secondary structure																		.							S	S	S	T	T			T															T	T	T											S					S	S														T	T
Template Predicted Secondary structure																		.
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.		.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
									424	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	I	Y	V	L	V	E	N	P	I	C	A	G	G	L	T	A	I	L	L	N	I	I	L	P	G
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	P	L	P	A	G	V	F	V	P	S	F	L	I	G	A	G	F	G	R	L	Y	G	E	L	M	R	V	V	F	G	N
Template Known Secondary structure		S	S	S	B		B																										T
Template Predicted Secondary structure
Template SS confidence
		423	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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