 |
Job Description | P52127 | Confidence | 5.39% | Date | Thu Jan 5 12:05:31 GMT 2012 |
Rank | 66 | Aligned Residues | 65 |
% Identity | 11% | Template | d1pv8a_ |
SCOP info | TIM beta/alpha-barrel
| Aldolase
| 5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase)
|
Resolution | 2.20 |
|
 |
  |   |
459 | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | |
|
. | . | 480 | . | . | . | |
|
|
. | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . |
Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |
|
| . | . |
|
|  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | D | R | F | T | F | V | L | F | V | G | Y | D | S | N | L | L | T | E | . |
. |
P | E | T | P | G | F | . |
. |
. |
E | D | D | L | E | K | E | T | A | V | L | F | E | K | F | A | A | D | L | I | E | D | S | P | F | A | N | L | C | I | H | V | F | I | Y | P | A | P | S | L | E | R | L | T | Q | L | V | D | E | K |
Query Conservation |   |
|
|   |
|   |
|
|
|
|
|   |
|
|
|   |   |
|   |
| . | . |
|   |   |   |
|
| . | . | . |   |
|   |
|
|   |
|
|   |   |   |   |
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|   |
|
|
|   |
|
|   |   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|
|
|
|
|   |
|
|   |   |   |   |   |   |
|   |
|
|
|
|
|   |
|   |
|
|
|   |
|   |   |   |
|   |   | . | . | . | . |   |   |   |   |
|
|   | . | . | . | . | . | . | . | . | . |   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |
|
|
|   |
|
Template Sequence |   |
A | S | N | L | I | Y | P | I | F | V | T | D | V | P | D | D | I | Q | P | I | T | S | L | P | G | V | A | R | Y | G | V | K | R | L | E | E | M | L | R | P | . |
. |
. |
. |
L | V | E | E | G | L | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
C | V | L | I | F | G | V | P | E | E | S | P | A | I | E | A | I | H | L | L |
Template Known Secondary structure |   |
G | G | G |  |  |  |  |  |  |  |
| S |
| T | T |
|  |  |  |
| S | S | S | T | T |
|  |  |  |
|  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  | T |
|
| . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
|
|
|
| S |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
28 | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | |
|
|
|
. | . | 70 | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . |
  |
  |   |
534 | . | . |
Predicted Secondary structure |   |
 |  |  |
Query SS confidence |   |
|
|
|
Query Sequence |   |
V | R | E |
Query Conservation |   |
|
|   |
Alig confidence |   |
|
|
|
Template Conservation |   |
|   |   |
Template Sequence |   |
R | K | T |
Template Known Secondary structure |   |
 |  |  |
Template Predicted Secondary structure |   |
 |  |  |
Template SS confidence |   |
|
|
|
  |   |
109 | 110 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|