 |
Job Description | P52127 | Confidence | 4.30% | Date | Thu Jan 5 12:05:31 GMT 2012 |
Rank | 93 | Aligned Residues | 50 |
% Identity | 18% | Template | c2vmlD_ |
PDB info |
PDB header:photosynthesis | Chain: D: PDB Molecule:phycocyanin beta chain; |
PDBTitle: the monoclinic structure of phycocyanin from gloeobacter2 violaceus
|
Resolution | 2.40 Å |
|
 |
  |   |
107 | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
| . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | I | V | T | E | E | K | V | N | K | T | L | E | Y | L | T | I | S | P | N | A | R | L | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
K | P | G | R | Q | E | L | I | D | D | L | N | K | R | T | D | N | F | L | T | D | S | G | I | S | V | S |
Query Conservation |   |
|   |   |
|   |
|
|
|   |   |   |
|   |   |
|
|   |   |   |   |   |
|   |   | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
|   |   |   |   |
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |   |
|
|   |   |
|   |   |
|   |   | . |
|   |   |   |
|
|   |
|
|   |   |
|   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |
|   |
|   |   |   |
|
|   |   |
|   |
Template Sequence |   |
S | F | L | S | E | Q | E | L | N | Q | L | T | N | L | V | K | . |
E | S | N | K | R | L | D | A | V | N | A | I | T | G | N | A | A | E | I | I | S | D | A | A | H | K | L | F | A | E | Q | T | D | L | I | R | P | G | G | N | A | Y | P |
Template Known Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | T |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| G | G | G | G | S | T | T | S | T | T |
| S |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | |
. | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|