Return to main results Retrieve Phyre Job Id

Job DescriptionP52127
Confidence5.79%DateThu Jan 5 12:05:31 GMT 2012
Rank59Aligned Residues41
% Identity12%Templatec2pf4E_
PDB info PDB header:hydrolase regulator/viral proteinChain: E: PDB Molecule:small t antigen; PDBTitle: crystal structure of the full-length simian virus 40 small t antigen2 complexed with the protein phosphatase 2a aalpha subunit
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   107..110.........120.........130.........140.......
Predicted Secondary structure 















Query SS confidence 








































Query Sequence  SIVTEEKVNKTLEYLTISPNARLDKPGRQELIDDLNKRTDN
Query Conservation 
  
 


   
  

     
       
    
 
    
Alig confidence 








































Template Conservation    

  
    
 



   
  
   

 

       

Template Sequence  KVLNREESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHP
Template Known Secondary structure  TTS
TTT

GGGTT
GGG
S
Template Predicted Secondary structure 













Template SS confidence 








































   3......10.........20.........30.........40...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions