Return to main results Retrieve Phyre Job Id

Job DescriptionP42911
Confidence4.40%DateThu Jan 5 12:02:08 GMT 2012
Rank89Aligned Residues67
% Identity19%Templated1f1sa1
SCOP infoalpha/alpha toroid Chondroitin AC/alginate lyase Hyaluronate lyase-like catalytic, N-terminal domain
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.........40.........50.........60...... ...70....... ..80.......
Predicted Secondary structure 





...........

.......



Query SS confidence 








































. . . . . . . . . . .










. . . . . . .









Query Sequence  YERMQAGGFTWAMLPILKKIYKDDKPGLSAAMKDNLEFINT. . . . . . . . . . . HPNLVGFLMGL. . . . . . . LISMEEKGEN
Query Conservation 




  

   
 
 




  
 
    

 


 



........... 
     
 

.......  



  
 
Alig confidence 











.


.




.


.













...........










.......









Template Conservation    

  

 

 . 

.
 

 .
  .
   
  

       
          


  


 
  
   



 
 
  
Template Sequence  YRRLEDLAKQIT. NPH. STIYK. NEK. AIRTVKESLAWLHQNFYNVNKDIEGSANWWDFEIGVPRSITGTLSLMNNYFTD
Template Known Secondary structure  T.
TT.STTTT.
.TSSTT



TTS
TTGGGS
Template Predicted Secondary structure  .


.




.
.

























Template SS confidence 















































































   320.........330. ... ..... 340.. .......350.........360.........370.........380.........390.....
 
   88.90......
Predicted Secondary structure 
Query SS confidence 








Query Sequence  RDTIKGLKV
Query Conservation     
  


Alig confidence 








Template Conservation           
Template Sequence  AEIKTYTDP
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 








   396...400....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions