Job Description P0A870 Confidence 100.00% Date Thu Jan 5 11:07:02 GMT 2012 Rank 9 Aligned Residues 208 % Identity 37% Template c3s1vD_ PDB info PDB header:transferase Chain: D: PDB Molecule:probable transaldolase; PDBTitle: transaldolase from thermoplasma acidophilum in complex with d-fructose2 6-phosphate schiff-base intermediate Resolution 1.80 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.					.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.
Query SS confidence																.	.	.	.
Query Sequence		T	V	V	A	D	T	G	D	I	A	A	M	K	L	.	.	.	.	Y	Q	P	Q	D	A	T	T	N	P	S	L	I	L	N	A	A	Q	I	P	E	Y	R	K	L	I	D	D	A	V	A	W	A	K	Q	Q	S	N	D	R	A	Q	Q	I	V	D	A	T	D	K	L	A	V	N	I	G	L	E	I	L	K	L
Query Conservation																.	.	.	.
Alig confidence																.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	F	L	D	T	A	N	I	D	E	I	R	T	G	V	N	W	G	I	V	D	G	V	T	T	N	P	T	L	I	S	K	E	A	V	N	G	K	K	Y	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	I	I	R	E	I	L	K	I
Template Known Secondary structure																				T																S		T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.																														.	.	.	.	.	.	50	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	G	R	I	S	T	E	V	D	A	R	L	S	Y	D	T	E	A	S	I	A	K	A	K	R	L	I	K	L	Y	N	D	A	G	I	S	N	D	R	I	L	I	K	L	A	S	T	W	Q	G	I	R	A	A	E	Q	L	E	K	E	G	I	N	C	N	L	T	L	L	F	S	F	A	Q	A	R	A	C	A
Query Conservation
Alig confidence											.	.	.																			.	.	.	.	.	.	.
Template Conservation											.	.	.																			.	.	.	.	.	.	.
Template Sequence		V	D	G	P	V	S	V	E	V	.	.	.	V	S	T	K	Y	E	G	M	V	E	E	A	R	K	I	H	G	L	.	.	.	.	.	.	.	G	D	N	A	V	V	K	I	P	M	T	E	D	G	L	R	A	I	K	T	L	S	S	E	H	I	N	T	N	C	T	L	V	F	N	P	I	Q	A	L	L	A	A
Template Known Secondary structure			S	S							.	.	.				S													T	T	.	.	.	.	.	.	.		T	T							S	S													T	T										S
Template Predicted Secondary structure											.	.	.																			.	.	.	.	.	.	.
Template SS confidence
		53	.	.	.	.	.	.	60	.				.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.								80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.			.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.
Query SS confidence																																																																					.	.
Query Sequence		E	A	G	V	F	L	I	S	P	F	V	G	R	I	L	D	W	Y	K	A	N	T	D	K	K	E	Y	A	P	A	E	D	P	G	V	V	S	V	S	E	I	Y	Q	Y	Y	K	E	H	G	Y	E	T	V	V	M	G	A	S	F	R	N	I	G	E	I	L	E	.	.	L	A	G	C	D	R	L	T	I	A	P
Query Conservation																																																																					.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	A	G	V	T	Y	V	S	P	F	V	G	R	L	D	D	I	G	E	D	.	.	.	.	.	.	.	.	.	.	.	.	.	G	M	Q	I	I	D	M	I	R	T	I	F	N	N	Y	I	I	K	T	Q	I	L	V	A	S	I	R	N	P	I	H	V	L	R	S	A	V	I	G	A	D	V	V	T	V	P	F
Template Known Secondary structure			T	T		S					B							T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.															T	T			S					B	S			S											T		S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.														.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	L	K	E	L	A	E	S	E	G	A	I	E	R	K	L	S	Y	T	G	E	V	K	A	R	P	A	R	I	T	E	S	E	F	L	W	Q	H	N	Q	D	P	M	A	V	D	K	L	A	E	G	I	R	K	F	A	I	D	Q	E	K	L
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	V	L	K	S	L	M	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	P	K	T	D	E	G	L	A	K	F	L	E	D	W	K	K	V
Template Known Secondary structure							T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		190	.	.	.	.	.	.	.																																						.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions