Job Description P0A870 Confidence 21.74% Date Thu Jan 5 11:07:02 GMT 2012 Rank 122 Aligned Residues 153 % Identity 12% Template c3pjwA_ PDB info PDB header:lyase Chain: A: PDB Molecule:cyclic dimeric gmp binding protein; PDBTitle: structure of pseudomonas fluorescence lapd ggdef-eal dual domain, i23 Resolution 3.10 Å

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		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.						.	.	.	140	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.
Query Sequence		I	V	D	A	T	D	K	L	A	V	N	I	G	L	E	I	L	K	L	V	P	G	R	I	S	T	E	V	D	A	R	L	S	Y	D	T	E	A	S	I	A	K	A	K	R	L	I	K	L	Y	N	D	A	G	I	S	N	D	R	I	L	I	K	L	A	S	T	.	.	.	.	.	W	Q	G	I	R	A	A	E
Query Conservation																																																																					.	.	.	.	.
Alig confidence																																									.	.	.	.																									.	.	.	.	.
Template Conservation																																									.	.	.	.
Template Sequence		W	T	A	R	L	D	R	L	M	L	E	R	V	L	E	Q	M	A	G	H	E	E	S	L	A	L	N	L	S	S	A	T	L	A	D	P	Q	A	L	.	.	.	.	N	K	V	F	E	I	L	R	A	H	S	N	L	G	A	R	L	T	L	E	I	G	E	E	Q	L	P	E	Q	A	V	L	E	Q	L	T	R
Template Known Secondary structure																		G	G	G																S	S				.	.	.	.										T	G	G	G	T	T	T							G	G	G
Template Predicted Secondary structure																																									.	.	.	.
Template SS confidence
		473	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.					.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.				.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																.																				.	.	.
Query SS confidence																.																				.	.	.
Query Sequence		Q	L	E	K	E	G	I	N	C	N	L	T	L	L	.	F	S	F	A	Q	A	R	A	C	A	E	A	G	V	F	L	I	S	P	.	.	.	F	V	G	R	I	L	D	W	Y	K	A	N	T	D	K	K	E	Y	A	P	A	E	D	P	G	V	V	S	V	S	E	I	Y	Q	Y	Y	K	E	H	G	Y	E	T
Query Conservation																.																				.	.	.
Alig confidence																.																				.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Sequence		R	L	R	E	L	G	F	S	L	S	L	Q	R	F	G	G	R	F	S	M	I	G	N	L	A	R	L	G	L	A	Y	L	K	I	D	G	S	Y	I	R	A	I	D	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	S	D	K	R	L	F	I	E	A	I	Q	R	A	A	H	S	I	D	.	.	L
Template Known Secondary structure						T	T										S		G	G	G	T	S	S							S						T	T	T	T	T	T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	T	T	T	.	.
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template SS confidence
		549	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.															.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.			.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.			.	.	.	240	.	.
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		V	V	M	G	A	S	F	R	N	I	G	E	I	L	E	L	.	.	A	G	C	D	R	L
Query Conservation																		.	.
Alig confidence																		.	.
Template Conservation
Template Sequence		P	L	I	A	E	R	V	E	T	E	G	E	L	S	V	I	R	E	M	G	L	Y	G	V
Template Known Secondary structure										S									T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		613	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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