Job Description P0A870 Confidence 23.82% Date Thu Jan 5 11:07:02 GMT 2012 Rank 111 Aligned Residues 135 % Identity 25% Template c3ivuB_ PDB info PDB header:transferase Chain: B: PDB Molecule:homocitrate synthase, mitochondrial; PDBTitle: homocitrate synthase lys4 bound to 2-og Resolution 2.72 Å

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		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.			160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																																							.																										.	.
Query SS confidence																																							.																										.	.
Query Sequence		D	A	R	L	S	Y	D	T	E	A	S	I	A	K	A	K	R	L	I	K	L	Y	N	D	A	G	I	S	N	D	R	I	L	I	K	L	A	.	S	T	W	Q	G	I	R	A	A	E	Q	L	E	K	E	G	I	N	C	N	L	T	L	L	F	.	.	S	F	A	Q	A	R	A	C	A	E	A	G	V	F	L
Query Conservation																																							.																										.	.
Alig confidence																							.	.	.	.					.	.							.																										.	.
Template Conservation																							.	.	.	.					.	.
Template Sequence		F	A	N	A	F	F	D	T	E	K	K	I	Q	I	A	K	A	L	D	N	F	.	.	.	.	G	V	D	Y	.	.	I	E	L	T	S	P	V	A	S	E	Q	S	R	Q	D	C	E	A	I	C	K	L	G	L	K	C	K	I	L	T	H	I	R	C	H	M	D	D	A	R	V	A	V	E	T	G	V	D	G
Template Known Secondary structure		S	T	T																			.	.	.	.	T		S		.	.						G	G	G													T	S			S	S								S											T	T		S
Template Predicted Secondary structure																							.	.	.	.					.	.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.					.	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.			.	.	.	.	.	230	.	.	.	.	.	.							.	.	.	240	.	.	.	.	.
Predicted Secondary structure																																																				.	.													.	.	.	.	.	.
Query SS confidence																																																				.	.													.	.	.	.	.	.
Query Sequence		I	S	P	F	V	G	R	I	L	D	W	Y	K	A	N	T	D	K	K	E	Y	A	P	A	E	D	P	G	V	V	S	V	S	E	I	Y	Q	Y	Y	K	E	H	G	Y	E	T	V	V	M	G	.	.	A	S	F	R	N	I	G	E	I	L	E	L	.	.	.	.	.	.	A	G	C	D	R	L	T	I	A
Query Conservation																																																				.	.													.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.																							.	.													.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.
Template Sequence		V	D	V	V	I	G	T	S	Q	Y	L	R	K	Y	S	H	D	M	T	Y	I	.	.	.	.	.	.	.	I	D	S	A	T	E	V	I	N	F	V	K	S	K	G	I	E	V	R	F	S	S	E	D	S	F	R	S	D	L	V	D	L	L	S	L	Y	K	A	V	D	K	I	G	V	N	R	V	G	I	A
Template Known Secondary structure								G	G	G													.	.	.	.	.	.	.														T	T								T	T	G	G	G	S																		S
Template Predicted Secondary structure																							.	.	.	.	.	.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.								.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions