Job Description P0A870 Confidence 23.84% Date Thu Jan 5 11:07:02 GMT 2012 Rank 109 Aligned Residues 125 % Identity 17% Template c2zrvC_ PDB info PDB header:isomerase Chain: C: PDB Molecule:isopentenyl-diphosphate delta-isomerase; PDBTitle: crystal structure of sulfolobus shibatae isopentenyl2 diphosphate isomerase in complex with reduced fmn. Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.				.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.										.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure												.										.	.	.																					.	.	.	.	.	.	.	.	.
Query SS confidence												.										.	.	.																					.	.	.	.	.	.	.	.	.
Query Sequence		I	R	A	A	E	Q	L	E	K	E	.	G	I	N	C	N	L	T	L	L	.	.	.	F	S	F	A	Q	A	R	A	C	A	E	A	G	V	F	L	I	S	P	F	.	.	.	.	.	.	.	.	.	V	G	R	I	L	D	W	Y	K	A	N	T	D	K	K	E	Y	A	P	A	E	D	P	G	V	V	S	V
Query Conservation												.										.	.	.																					.	.	.	.	.	.	.	.	.
Alig confidence												.										.	.	.																					.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	E	K	L	R	D	I	S	K	E	L	S	V	P	I	I	V	K	E	S	G	N	G	I	S	M	E	T	A	K	L	L	Y	S	Y	G	I	K	N	F	D	T	S	G	Q	G	G	T	N	W	I	A	I	E	M	I	R	D	I	R	R	G	N	W	K	A	E	S	A	K	N	F	L	D	W	G	V	P	T	A
Template Known Secondary structure													S	S							S	S	S													T	T									B	T	S	B													T	T		T								T	T	T		S		B
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.			.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		S	E	I	Y	Q	Y	Y	K	E	H	G	Y	E	T	V	V	M	G	A	S	F	R	N	I	G	E	I	L	E	L	.	.	A	G	C	D	R	L	T	I	A	P	A	L	L	K	E	L	A	E	S	E	G	A	I	E	R	K	L	S
Query Conservation																																.	.
Alig confidence																																.	.
Template Conservation
Template Sequence		A	S	I	M	E	V	R	Y	S	V	P	D	S	F	L	V	G	S	G	G	I	R	S	G	L	D	A	A	K	A	I	A	L	G	A	D	I	A	G	M	A	L	P	V	L	K	S	A	I	E	G	K	E	S	L	E	Q	F	F	R
Template Known Secondary structure											S	T	T							S	S			S											T		S
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions