Job Description P0A870 Confidence 28.11% Date Thu Jan 5 11:07:02 GMT 2012 Rank 85 Aligned Residues 119 % Identity 24% Template c2vdcF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:glutamate synthase [nadph] large chain; PDBTitle: the 9.5 a resolution structure of glutamate synthase from2 cryo-electron microscopy and its oligomerization behavior3 in solution: functional implications. Resolution 9.50 Å

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		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		V	D	A	R	L	S	Y	D	T	E	A	S	I	A	K	A	K	R	L	I	K	L	Y	N	D	A	G	I	S	N	D	R	I	L	I	K	L	A	S	T	W	Q	G	I	R	A	A	E	Q	L	E	K	E	G	I	N	C	N	L	T	L	L	F	S	F	A	Q	A	R	A	C	A	E	A	G	V	F	L	I	.
Query Conservation																																																																																	.
Alig confidence																											.	.														.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation																											.	.														.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	S	P	P	P	H	H	D	I	Y	S	I	E	D	L	A	Q	L	I	Y	D	L	K	Q	I	.	.	N	P	D	A	K	V	T	V	K	L	V	S	R	.	S	G	I	G	T	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	G	V	A	K	A	N	A	D	I	I	L
Template Known Secondary structure					S	S		T	T		S	S															.	.		T	T											.	T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T		S
Template Predicted Secondary structure																											.	.														.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		966	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990			.	.	.	.	.	.	.	.	.	1000	.	.	.		.	.	.	.	.	.																					1010	.	.	.	.	.	.	.	.	.	1020	.	.
												176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.			.	.	.	230	.	.	.	.			.	.	.	.	.	240
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																															.						.	.									.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																																															.						.	.									.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	S	P	F	V	G	R	I	L	D	W	Y	K	A	N	T	D	K	K	E	Y	A	P	A	E	D	P	G	V	V	S	V	S	E	I	Y	Q	Y	Y	K	E	H	G	Y	E	T	V	.	V	M	G	A	S	.	.	F	R	N	I	G	E	I	L	.	.	E	L	A	G	C	D
Query Conservation		.	.	.	.	.	.	.	.	.	.																																															.						.	.									.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.						.	.									.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	S	G	N	S	G	G	T	G	A	S	P	Q	T	S	I	K	F	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	P	W	E	M	G	L	S	E	V	H	Q	V	L	T	L	N	R	L	R	H	R	V	R	L	R	T	D	G	G	L	K	T	G	R	D	I	V	I	A	A	M	L	G	A	E
Template Known Secondary structure					T	T				S	S									S	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		T	T		T	T	T	S						S	S			S										T	T		S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1023	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.															.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	T	I	A	P	A	L	L	K	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	F	G	I	G	T	A	S	L	I	A	M
Template Known Secondary structure													T
Template Predicted Secondary structure
Template SS confidence
		1089	1090	.	.	.	.	.	.	.	.	.	1100

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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