Job Description P0A953 Confidence 99.92% Date Thu Jan 5 11:09:24 GMT 2012 Rank 56 Aligned Residues 337 % Identity 15% Template d1teda_ SCOP info Thiolase-like Thiolase-like Chalcone synthase-like Resolution 2.25

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		3	.	.	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.								.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure														.																																								.	.	.	.	.	.	.							.
Query SS confidence														.																																								.	.	.	.	.	.	.							.
Query Sequence		R	A	V	I	T	G	L	G	I	V	S	S	.	I	G	N	N	Q	Q	E	V	L	A	S	L	R	E	G	R	S	G	I	T	F	S	Q	E	L	K	D	S	G	M	R	S	H	V	W	G	N	V	K	.	.	.	.	.	.	.	L	D	T	T	G	L	.	I	D	R	K	V	V	R	F	M	S	D	A	S	I
Query Conservation														.																																								.	.	.	.	.	.	.							.
Alig confidence														.																																								.	.	.	.	.	.	.							.
Template Conservation
Template Sequence		V	A	V	I	E	G	L	A	T	G	T	P	R	R	V	V	N	Q	S	D	A	A	D	R	V	A	E	L	G	Q	R	E	R	I	P	R	V	Y	Q	K	S	R	I	T	T	R	R	M	A	V	D	P	L	D	A	K	F	D	V	F	R	R	E	P	A	T	I	R	D	R	M	H	L	F	Y	E	H	A	V	P
Template Known Secondary structure														S														T				T	T								T	S			S					S	S		T	T	S	T	T					T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	F	L	S	M	E	Q	A	I	A	D	A	G	L	S	P	E	A	Y	Q	N	N	P	R	V	G	L	I	A	G	S	G	G	G	S	P	R	F	Q	V	F	G	A	D	A	M	R	G	P	R	G	L	K	A	V	G	P	Y	V	V	T	K	A	M	A	S	G	V	S	A	C	L	A	T	P	F	K	I	H
Query Conservation
Alig confidence																								.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	V	D	V	S	K	R	A	L	A	G	L	P	Y	R	A	A	E	I	G	L	.	.	.	.	.	L	V	L	A	T	S	T	G	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	P	G	V	D	V	A	I	V	K	E	L	G	L	S
Template Known Secondary structure												T	T					G	G	G				.	.	.	.	.						S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S											T
Template Predicted Secondary structure																								.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.						.	.	140	.	.	.	.	.	.																													.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		154	.	.	.	.	.				160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure								.	.	.
Query SS confidence								.	.	.
Query Sequence		G	V	N	Y	S	I	.	.	.	S	S	A	C	A	T	S	A	H	C	I	G	N	A	V	E	Q	I	Q	L	G	K	Q	D	I	V	F	A	G	G	G	E	E	L	C	W	E	M	A	C	E	F	D	A	M	G	A	L	S	T	K	Y	N	D	T	P	E	K	A	S	R	T	Y	D	A	H	R	D	G	F	V
Query Conservation								.	.	.
Alig confidence								.	.	.																																																						.	.
Template Conservation																																																																.	.
Template Sequence		P	S	I	S	R	V	V	V	N	F	M	G	C	A	A	A	M	N	A	L	G	T	A	T	N	Y	V	R	A	H	P	A	M	K	A	L	V	V	C	I	E	L	C	S	V	N	A	V	F	A	D	D	I	N	D	V	V	I	H	S	L	F	.	.	G	D	G	C	A	A	L	V	I	G	A	S	Q	V	Q	E
Template Known Secondary structure		T	T								S		G	G	G																S	T	T												G	G	G					S	S										B	.	.														T	T	S
Template Predicted Secondary structure																																																																.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.			.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.			.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290				.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure																																													.	.																		.	.	.
Query SS confidence																																													.	.																		.	.	.
Query Sequence		I	A	G	G	G	G	M	V	V	V	E	E	L	E	H	A	L	A	R	G	A	H	I	Y	A	E	I	V	G	Y	G	A	T	S	D	G	A	D	M	V	A	P	S	.	.	G	E	G	A	V	R	C	M	K	M	A	M	H	G	V	D	T	.	.	.	P	I	D	Y	L	N	S	H	G	T	S	T	P	V	G
Query Conservation																																													.	.																		.	.	.
Alig confidence																																													.	.																		.	.	.
Template Conservation
Template Sequence		K	L	E	P	G	K	V	V	V	R	S	S	F	S	Q	L	L	D	N	T	E	D	G	I	V	L	G	V	N	H	N	G	I	T	C	E	L	S	E	N	L	P	G	Y	I	F	S	G	V	A	P	V	V	T	E	M	L	W	D	N	G	L	Q	I	S	D	I	D	L	W	A	I	H	P	G	G	P	K	I	I
Template Known Secondary structure					T	T													T	T		T	T	S							T	T								T	T																				T	T			G	G	G		S							S
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		306	.	.	.	310	.	.	.	.	.	.	.	.				.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure															.	.	.
Query SS confidence															.	.	.
Query Sequence		D	V	K	E	L	A	A	I	R	E	V	F	G	.	.	.	D	K	S	P	A	I	S	A	T	K	A	M	T	G	H	S	L	G	A	A	G	V	Q	E	A	I	Y	S	L	L	M	L	E	H	G	F	I	A	P	S	I	N	I	E	E	L	D	E	Q	A	A	G	L	N	I	V	T	E	T	T	D	R	E	L
Query Conservation															.	.	.
Alig confidence						.	.	.	.	.					.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	Q	S	V	.	.	.	.	.	R	S	L	G	I	S	A	E	L	A	A	Q	S	W	D	V	L	A	R	F	G	N	M	L	S	V	S	L	I	F	V	L	E	T	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	Q	Q	A	E	S	A	K	A	I
Template Known Secondary structure						.	.	.	.	.				T			G	G	G	G												B		T												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S		S	S	S	S	S	S
Template Predicted Secondary structure						.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		321	.	.	.						.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.																											360	.	.	.	.	.	.	.	.	.
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	V	M	S	N	S	F	G	F	G	G	T	N	A	T	L	V	M	R	K	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	T	G	V	A	F	A	F	G	P	G	V	T	V	E	G	M	L	F	D	I	I	R
Template Known Secondary structure											T	T	T
Template Predicted Secondary structure
Template SS confidence
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions