Job Description P0A953 Confidence 100.00% Date Thu Jan 5 11:09:24 GMT 2012 Rank 3 Aligned Residues 403 % Identity 61% Template c3lrfA_ PDB info PDB header:transferase Chain: A: PDB Molecule:beta-ketoacyl synthase; PDBTitle: crystal structure of beta-ketoacyl synthase from brucella2 melitensis Resolution 1.60 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	R	A	V	I	T	G	L	G	I	V	S	S	I	G	N	N	Q	Q	E	V	L	A	S	L	R	E	G	R	S	G	I	T	F	S	Q	E	L	K	D	S	G	M	R	S	H	V	W	G	N	V	K	L	D	T	T	G	L	I	D	R	K	V	V	R	F	M	S	D	A	S	I	Y	A	F	L	S	M	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	R	R	V	V	V	T	G	M	G	I	V	S	S	I	G	S	N	T	E	E	V	T	A	S	L	R	E	A	K	S	G	I	S	R	A	E	E	Y	A	E	L	G	F	R	C	Q	V	H	G	A	P	D	I	D	I	E	S	L	V	D	R	R	A	M	R	F	H	G	R	G	T	A	W	N	H	I	A	M	D
Template Known Secondary structure														B	T	T	B	S	S											T														T		S															S		T	T	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	I	A	D	A	G	L	S	P	E	A	Y	Q	N	N	P	R	V	G	L	I	A	G	S	G	G	G	S	P	R	F	Q	V	F	G	A	D	A	M	R	G	P	R	G	L	K	A	V	G	P	Y	V	V	T	K	A	M	A	S	G	V	S	A	C	L	A	T	P	F	K	I	H	G	V	N	Y	S	I	S
Query Conservation
Alig confidence															.																												.
Template Conservation															.																												.
Template Sequence		Q	A	I	A	D	A	G	L	T	E	E	E	V	.	S	N	E	R	T	G	I	I	M	G	S	G	G	P	S	T	R	T	I	V	D	S	A	D	I	T	R	.	E	K	G	P	K	R	V	G	P	F	A	V	P	K	A	M	S	S	T	A	S	A	T	L	A	T	F	F	K	I	K	G	I	N	Y	S	I	S
Template Known Secondary structure								T							.	S	S	T	T								S	S															.				G	G	G	G		T	T						S	T	T										T	T			S
Template Predicted Secondary structure															.																												.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	C	A	T	S	A	H	C	I	G	N	A	V	E	Q	I	Q	L	G	K	Q	D	I	V	F	A	G	G	G	E	E	L	C	W	E	M	A	C	E	F	D	A	M	G	A	L	S	T	K	Y	N	D	T	P	E	K	A	S	R	T	Y	D	A	H	R	D	G	F	V	I	A	G	G	G	G	M	V	V	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A	C	A	T	S	N	H	C	I	G	N	A	Y	E	M	I	Q	Y	G	K	Q	D	R	M	F	A	G	G	C	E	D	L	D	W	T	L	S	V	L	F	D	A	M	G	A	M	S	S	K	Y	N	D	T	P	S	T	A	S	R	A	Y	D	K	N	R	D	G	F	V	I	A	G	G	A	G	V	L	V	L
Template Known Secondary structure			G	G	G															T	T	S		S																					T	T		B			T	T	T	T	S	G	G	G	S			T	T	B	T	T			S	B		B	B
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		E	E	L	E	H	A	L	A	R	G	A	H	I	Y	A	E	I	V	G	Y	G	A	T	S	D	G	A	D	M	V	A	P	S	G	E	G	A	V	R	C	M	K	M	A	M	H	G	V	D	T	P	I	D	Y	L	N	S	H	G	T	S	T	P	V	G	D	V	K	E	L	A	A	I	R	E	V	F	G	.	.
Query Conservation																																																																																.	.
Alig confidence																																																																																.	.
Template Conservation
Template Sequence		E	D	L	E	T	A	L	A	R	G	A	K	I	Y	G	E	I	V	G	Y	G	A	T	S	D	G	Y	D	M	V	A	P	S	G	E	G	A	I	R	C	M	K	M	A	L	S	T	V	T	S	K	I	D	Y	I	N	P	H	A	T	S	T	P	A	G	D	A	P	E	I	E	A	I	R	Q	I	F	G	A	G
Template Known Secondary structure										T	T																	S		S	S	S			S												T	T			S											S																		S	G
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.		.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		D	K	S	P	A	I	S	A	T	K	A	M	T	G	H	S	L	G	A	A	G	V	Q	E	A	I	Y	S	L	L	M	L	E	H	G	F	I	A	P	S	I	N	I	E	E	L	D	E	Q	A	A	G	L	N	I	V	T	.	E	T	T	D	R	E	L	T	T	V	M	S	N	S	F	G	F	G	G	T	N	A
Query Conservation																																																											.
Alig confidence																																																											.
Template Conservation
Template Sequence		D	V	C	P	P	I	A	A	T	K	S	L	T	G	H	S	L	G	A	T	G	V	Q	E	A	I	Y	S	L	L	M	M	Q	N	N	F	I	C	E	S	A	H	I	E	E	L	D	P	A	F	A	D	M	P	I	V	R	K	R	I	D	N	V	Q	L	N	T	V	L	S	N	S	F	G	F	G	G	T	N	A
Template Known Secondary structure		G	G	S			B			T						B		G	G	G																T						T	T		S	S	B		G	G	G	T	T	S		B		S	S				S													T	T	T
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
		398	.	400	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	V	M	R	K	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	V	F	Q	R	Y	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		399	400	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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