Job Description P0A953 Confidence 99.24% Date Thu Jan 5 11:09:24 GMT 2012 Rank 92 Aligned Residues 252 % Identity 13% Template c3lehA_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative hydroxymethylglutaryl-coa synthase; PDBTitle: the crystal structure of smu.943c from streptococcus mutans ua159 Resolution 1.70 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		M	K	R	A	V	I	T	G	L	G	I	V	S	S	I	G	.	N	N	Q	Q	E	V	L	A	S	L	R	E	G	R	S	G	I	T	F	S	Q	E	L	K	D	S	G	M	R	S	H	V	W	G	N	V	K	L	D	T	T	G	L	I	D	R	K	V	V	R	F	M	S	D	A	S	I	Y	A	F	L	S	M
Query Conservation																		.
Alig confidence				.														.															.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.																													.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	R	.	I	G	I	D	K	I	G	F	T	S	S	Q	Y	V	L	N	M	K	D	L	A	E	A	R	G	E	Q	K	.	.	.	.	.	.	.	F	S	K	G	L	L	L	N	A	L	S	I	A	P	I	T	D	D	V	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	A	G	S	A
Template Known Secondary structure				.												S													T				.	.	.	.	.	.	.	T	T	T	T	T										T	T	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure				.																													.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30								.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.																.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.			.
Predicted Secondary structure																																																																															.	.
Query SS confidence																																																																															.	.
Query Sequence		E	Q	A	I	A	D	A	G	L	S	P	E	A	Y	Q	N	N	P	R	V	G	L	I	A	G	S	G	G	G	S	P	R	F	Q	V	F	G	A	D	A	M	R	G	P	R	G	L	K	A	V	G	P	Y	V	V	T	K	A	M	A	S	G	V	S	A	C	L	A	T	P	F	K	I	H	G	V	N	.	.	Y
Query Conservation																																																																															.	.
Alig confidence										.	.							.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Conservation										.	.							.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	E	I	L	T	A	E	D	.	.	K	E	K	I	D	M	.	.	.	.	.	V	I	L	A	T	E	S	D	S	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	A	V	Y	V	H	S	L	L	G	I	Q	P	F	A	R	S	F
Template Known Secondary structure			T	T						.	.							.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T			S	S
Template Predicted Secondary structure										.	.							.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		60	.	.	.	.	.	.	.			.	.	70	.	.	.						.	.	.	.	.	.	80	.	.	.																															.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	S	S	A	C	A	T	S	A	H	C	I	G	N	A	V	E	Q	I	Q	L	G	K	Q	D	I	V	F	A	G	G	G	E	E	L	C	W	E	M	A	C	E	F	D	A	M	G	A	L	S	T	K	Y	N	D	T	P	E	K	A	S	R	T	Y	D	A	H	R	D	G	F	V	I	A	G	G	G	G	M
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	M	K	E	A	C	Y	S	A	T	A	A	L	N	Y	A	K	L	H	V	E	K	H	P	D	T	R	V	L	V	L	A	S	D	I	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	I	G	T	P	G	E	S	T	Q	G	A	G	S	I	A
Template Known Secondary structure					S	T	T	T																S	T	T													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	T	T	G	G	G
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.																												.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290				.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																																																							.	.	.																					.	.	.	.
Query SS confidence																																																							.	.	.																					.	.	.	.
Query Sequence		V	V	V	E	E	L	E	H	A	L	A	R	G	A	H	I	Y	A	E	I	V	G	Y	G	A	T	S	D	G	A	D	M	V	A	P	S	G	E	G	A	V	R	C	M	K	M	A	M	H	G	V	D	T	.	.	.	P	I	D	Y	L	N	S	H	G	T	S	T	P	V	G	D	V	K	E	L	.	.	.	.
Query Conservation																																																							.	.	.																					.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.																																								.	.	.																					.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.
Template Sequence		M	L	V	K	K	D	.	.	.	.	.	.	.	.	P	R	I	L	I	L	H	D	E	T	L	A	Q	T	R	D	I	S	T	K	Q	Y	L	D	M	L	K	T	T	W	A	E	Y	Q	K	R	F	D	V	S	L	T	D	F	A	A	F	C	F	H	L	P	F	P	K	L	A	L	K	G	F	N	K	I	D	K
Template Known Secondary structure							S	.	.	.	.	.	.	.	.		S	S					S																														T			G	G	G		S							S	S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.									.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
				311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	A	A	I	R	E	V	F	G	D	K	S	P	A	I	S	A	T	K	A	M	T	G	H	S	L	G	A	A	G	V	Q	E	A	I	Y	S	L
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		Q	P	S	D	L	Q	E	K	L	K	V	N	F	E	A	S	I	L	Y	S	K	Q	I	G	N	I	Y	T	G	S	L	F	L	G	L	L	S	L	L
Template Known Secondary structure																									B			G	G	G
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions