Job Description P0A953 Confidence 99.83% Date Thu Jan 5 11:09:24 GMT 2012 Rank 69 Aligned Residues 287 % Identity 21% Template c3h76A_ PDB info PDB header:transferase Chain: A: PDB Molecule:pqs biosynthetic enzyme; PDBTitle: crystal structure of pqsd, a key enzyme in pseudomonas2 aeruginosa quinolone signal biosynthesis pathway Resolution 1.80 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		R	A	V	I	T	G	L	G	I	V	S	S	I	G	.	N	N	Q	Q	E	V	L	A	S	L	R	E	G	R	S	G	I	T	F	S	Q	E	L	K	D	S	G	M	R	S	H	V	W	G	N	V	K	L	D	T	T	G	L	I	D	R	K	V	V	R	F	M	S	D	A	S	I	Y	A	F	L	S	M	E	Q
Query Conservation																.
Alig confidence																.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Template Sequence		N	P	I	L	A	G	L	G	F	S	L	P	K	R	Q	V	S	N	H	D	L	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	I	N	T	S	D	E	F	I	V	E	R	T	G	V	R	T	R	Y	H	V	E	P	E	.	.	.	.	.	Q	A	V	S	A	L	M	V	P	A	A	R	Q
Template Known Secondary structure														S										T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	S																				T	T	.	.	.	.	.			T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.																.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.						.	50	.	.	.	.	.	.	.	.	.	60	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160
Predicted Secondary structure																																																																											.
Query SS confidence																																																																											.
Query Sequence		A	I	A	D	A	G	L	S	P	E	A	Y	Q	N	N	P	R	V	G	L	I	A	G	S	G	G	G	S	P	R	F	Q	V	F	G	A	D	A	M	R	G	P	R	G	L	K	A	V	G	P	Y	V	V	T	K	A	M	A	S	G	V	S	A	C	L	A	T	P	F	K	I	H	G	.	V	N	Y	S	I	S
Query Conservation																																																																											.
Alig confidence																.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation																.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	I	E	A	A	G	L	L	P	E	D	I	D	L	.	.	.	.	.	L	L	V	N	T	L	S	P	D	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	D	P	S	Q	A	C	L	I	Q	P	L	L	G	L	R	H	I	P	V	L	D	I	R
Template Known Secondary structure						T	T			G	G	G				.	.	.	.	.						S	S		S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S											T			S
Template Predicted Secondary structure																.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.						.	.	.	.	80	.	.	.	.	.																												.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		S	A	C	A	T	S	A	H	C	I	G	N	A	V	E	Q	I	Q	L	G	K	Q	D	I	V	F	A	G	G	G	E	E	L	C	W	E	M	A	C	E	F	D	A	M	G	A	L	S	T	K	Y	N	D	T	P	E	K	A	S	R	T	Y	D	A	H	R	D	.	G	F	V	I	A	G	G	G	G	M	V	V
Query Conservation																																																																					.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	Q	C	S	G	L	L	Y	G	L	Q	M	A	R	G	Q	I	L	A	G	L	A	R	H	V	L	V	V	C	G	E	V	L	S	K	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	D	C	S	D	R	G	R	N	L	S	I	L	L	G	D	G	A	G	A	V	V
Template Known Secondary structure			G	G	G															T	T	S		S											G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	T	T	T					T	T	B
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.																							.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.																																				.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	E	E	L	E	H	A	L	A	R	G	A	H	I	Y	A	E	I	V	G	Y	G	A	T	S	D	G	A	D	M	V	A	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	G	A	V	R	C	M	K	M	A
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.
Template Sequence		V	S	A	G	E	S	L	E	D	G	.	.	.	.	.	.	.	L	L	D	L	R	L	G	A	D	G	N	Y	F	D	L	L	M	T	A	A	P	G	S	A	S	P	T	F	L	D	E	N	V	L	R	E	G	G	G	E	F	L	M	R	G	R	P	M	F	E	H	A	S	Q	T	L	V	R	I	A	G	E	M
Template Known Secondary structure								S	S	S		.	.	.	.	.	.	.										G	G	G	G	G	G						S	S	T	T	S	S	S	S	S						T	T	T	T	T	S
Template Predicted Secondary structure												.	.	.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.								.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		285	.	.	.	.	290				.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure								.	.	.
Query SS confidence								.	.	.
Query Sequence		M	H	G	V	D	T	.	.	.	P	I	D	Y	L	N	S	H	G	T	S	T	P	V	G	D	V	K	E	L	A	A	I	R	E	V	F	G	D	K	S	P	A	I	S	A	T	K	A	M	T	G	H	S	L	G	A	A	G	V	Q	E	A	I	Y	S	L	L	M	L	E	H	G	F	I	A	P	S	I	N	I
Query Conservation								.	.	.
Alig confidence								.	.	.																				.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	A	H	E	L	T	L	D	D	I	D	H	V	I	C	H	Q	P	N	L	R	I	L	D	A	V	Q	.	.	.	.	.	E	Q	L	G	I	P	Q	H	K	F	A	V	T	V	D	R	L	G	N	M	A	S	A	S	T	P	V	T	L	A	M	F	W	P	D	I	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				T	T	T			G	G	G									S	S									.	.	.	.	.				T			G	G	G	B									B		G	G	G										G	G	G	S	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																														.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.						.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	L	D	E	Q	A	A	G	L	N	I	V	T	E	T	T	D	R	E	L	T	T	V	M	S	N	S	F	G	F	G	G	T	N	A	T	L	V	M	R	K	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	P	G	Q	R	V	L	V	L	T	Y	G	S	G	A	T	W	G	A	A	L	Y	R	K	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T										T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																				305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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