Job Description P0A953 Confidence 99.89% Date Thu Jan 5 11:09:24 GMT 2012 Rank 63 Aligned Residues 306 % Identity 16% Template c2x3eA_ PDB info PDB header:transferase Chain: A: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] synthase 3; PDBTitle: crystal structure of 3-oxoacyl-(acyl carrier protein)2 synthase iii, fabh from pseudomonas aeruginosa pao1 Resolution 1.81 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.																																												.
Query SS confidence																	.																																												.
Query Sequence		K	R	A	V	I	T	G	L	G	I	V	S	S	I	G	.	N	N	Q	Q	E	V	L	A	S	L	R	E	G	R	S	G	I	T	F	S	Q	E	L	K	D	S	G	M	R	S	H	V	W	G	N	V	K	L	D	T	T	G	L	.	I	D	R	K	V	V	R	F	M	S	D	A	S	I	Y	A	F	L	S	M
Query Conservation																	.																																												.
Alig confidence																	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	A	A	V	V	C	G	L	G	S	Y	L	P	E	A	V	L	S	N	D	M	L	A	A	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	T	S	D	A	W	I	S	S	R	T	G	V	R	Q	R	H	I	A	G	D	L	G	S	G	D	L	A	L	R	A	A
Template Known Secondary structure															S												T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T																			T	T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.																							.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		E	Q	A	I	A	D	A	G	L	S	P	E	A	Y	Q	N	N	P	R	V	G	L	I	A	G	S	G	G	G	S	P	R	F	Q	V	F	G	A	D	A	M	R	G	P	R	G	L	K	A	V	G	P	Y	V	V	T	K	A	M	A	S	G	V	S	A	C	L	A	T	P	F	K	I	H	G	.	V	N	Y	S
Query Conservation																																																																													.
Alig confidence																.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation																.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	A	A	L	A	S	A	G	L	E	R	V	D	A	.	.	.	.	.	.	.	V	V	L	A	T	S	T	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	C	C	P	A	T	A	P	R	V	A	A	R	L	G	L	V	G	A	L	A	F	D
Template Known Secondary structure									T		S			S		.	.	.	.	.	.	.						S	S		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	S		S								T	T		T	T	S
Template Predicted Secondary structure																.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.								.	.	.	.	.	80	.	.	.																												.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	S	A	C	A	T	S	A	H	C	I	G	N	A	V	E	Q	I	Q	L	G	K	Q	D	I	V	F	A	G	G	G	E	E	L	C	W	E	M	A	C	E	F	D	A	M	G	A	L	S	T	K	Y	N	D	T	P	E	K	A	S	R	T	Y	D	A	H	R	D	G	F	V	I	A	G	G	G	G	M	V
Query Conservation
Alig confidence																																																							.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.
Template Sequence		L	S	A	A	A	T	G	F	V	Y	G	L	A	S	V	G	S	L	I	S	A	G	L	A	D	S	A	L	L	V	G	V	D	T	F	S	H	T	L	D	P	A	D	R	S	T	R	A	L	F	G	D	G	.	.	.	.	.	.	.	.	.	A	G	A	V	V	L	R	A	G	D	A	E	E	E	G	A	L	L
Template Known Secondary structure					G	G	G															T	T	S		S										G	G	G	G	S		T	T								B				.	.	.	.	.	.	.	.	.											T	T	S	T	T	B
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.										160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.											.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290				.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.																		.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.																		.	.	.
Query Sequence		V	V	E	E	L	E	H	A	L	A	R	G	A	H	I	Y	A	E	I	V	G	Y	G	A	T	S	D	G	A	D	M	V	A	P	S	.	.	.	.	.	.	.	.	.	.	G	E	G	A	V	R	C	M	K	M	A	M	H	G	V	D	T	.	.	.	P	I	D	Y	L	N	S	H	G	T	S	T	P	V	G
Query Conservation																																					.	.	.	.	.	.	.	.	.	.																		.	.	.
Alig confidence										.																											.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Conservation										.
Template Sequence		A	F	D	L	G	S	D	G	.	H	Q	F	D	L	L	M	T	P	A	V	S	R	A	E	R	S	S	G	Q	A	S	N	Y	F	R	M	D	G	K	A	V	F	G	Q	A	V	T	Q	M	S	D	S	V	R	R	V	L	D	R	V	G	W	Q	A	S	D	L	H	H	L	V	P	H	Q	A	N	T	R	I	L
Template Known Secondary structure									G	.	G	G	T	T	S														T																																	T			G	G	G		S
Template Predicted Secondary structure										.
Template SS confidence
		178	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	K	E	L	A	A	I	R	E	V	F	G	D	K	S	P	A	I	S	A	T	K	A	M	T	G	H	S	L	G	A	A	G	V	Q	E	A	I	Y	S	L	L	M	L	E	H	G	F	I	A	P	S	I	N	I	E	E	L	D	E	Q	A	A	G	L	N	I	V	T	E	T	T	D	R	E	L	T	T	V
Query Conservation
Alig confidence						.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	A	V	A	.	.	.	.	.	D	Q	L	D	L	P	V	E	R	V	V	S	N	I	A	E	V	G	N	T	V	A	A	S	I	P	L	A	L	A	H	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Q	G	I	L	R	D	G	G	N	M
Template Known Secondary structure						.	.	.	.	.				T			G	G	G	B									B		G	G	G											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T		S		T	T
Template Predicted Secondary structure						.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		257	.	.	260						.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.																												.	.	.	.	.	.	300	.	.	.	.
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	N	S	F	G	F	G	G	T	N	A	T	L	V	M	R	K	L	K	D
Query Conservation
Alig confidence																			.
Template Conservation																			.
Template Sequence		V	L	T	G	F	G	A	G	L	T	W	G	S	V	A	L	R	.	W	P	K
Template Known Secondary structure								T	T	T									.
Template Predicted Secondary structure																			.
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.		.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions