Job Description P0A953 Confidence 100.00% Date Thu Jan 5 11:09:24 GMT 2012 Rank 2 Aligned Residues 388 % Identity 24% Template c2vz8B_ PDB info PDB header:transferase Chain: B: PDB Molecule:fatty acid synthase; PDBTitle: crystal structure of mammalian fatty acid synthase Resolution 3.2 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.						.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																				.																			.	.	.	.	.								.
Query SS confidence																																				.																			.	.	.	.	.								.
Query Sequence		M	K	R	A	V	I	T	G	L	G	I	V	S	S	I	G	N	N	Q	Q	E	V	L	A	S	L	R	E	G	R	S	G	I	T	.	F	S	Q	E	L	K	D	S	G	M	R	S	H	V	W	G	N	V	.	.	.	.	.	K	L	D	T	T	G	L	.	I	D	R	K	V	V	R	F	M	S	D	A	S	I
Query Conservation																																				.																			.	.	.	.	.								.
Alig confidence																																				.																			.	.	.	.	.								.
Template Conservation
Template Sequence		M	E	E	V	V	I	A	G	M	S	G	K	L	P	E	S	E	N	L	E	E	F	W	A	N	L	I	G	G	V	D	M	V	T	A	D	D	R	R	W	K	A	G	L	Y	G	L	P	R	R	M	G	K	L	K	D	L	S	R	F	D	A	S	F	F	G	V	H	S	K	Q	A	N	T	M	D	P	Q	L	R
Template Known Secondary structure														B	T	T	B	S	S										T	T								S	S	S	S		T	T	G	G	G			S						S		S	S				T	T	T	T	T								T	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	F	L	S	M	E	Q	A	I	A	D	A	G	L	S	P	E	A	Y	Q	N	N	P	R	V	G	L	I	A	G	S	G	G	G	S	P	R	F	Q	V	F	G	A	D	A	M	R	G	P	R	G	L	K	A	V	G	P	Y	V	V	T	K	A	M	A	S	G	V	S	A	C	L	A	T	P	F	K	I	H
Query Conservation
Alig confidence																								.																			.	.	.	.	.	.	.	.
Template Conservation																								.																			.	.	.	.	.	.	.	.
Template Sequence		M	L	L	E	V	T	Y	E	A	I	V	D	G	G	I	N	P	A	S	L	R	G	.	T	S	T	G	V	W	V	G	V	S	S	S	D	A	S	E	A	L	.	.	.	.	.	.	.	.	S	R	D	P	E	T	L	V	G	Y	S	M	I	G	C	Q	R	A	M	M	A	N	R	L	S	F	F	F	D	F	K
Template Known Secondary structure												G	G	G	T			G	G	G	G	T	T	.		S																T	.	.	.	.	.	.	.	.	T			S	S	S			G	G	G	G	G	G	T	S	T	T											T
Template Predicted Secondary structure																								.																			.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120									.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	N	Y	S	I	S	S	A	C	A	T	S	A	H	C	I	G	N	A	V	E	Q	I	Q	L	G	K	Q	D	I	V	F	A	G	G	G	E	E	L	C	W	E	M	A	C	E	F	D	A	M	G	A	L	S	T	K	Y	N	D	T	P	E	K	A	S	R	T	Y	D	A	H	R	D	G	F	V	I	A	G
Query Conservation
Alig confidence																																																	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.
Template Sequence		G	P	S	I	T	I	D	T	A	C	S	S	S	L	L	A	L	Q	S	A	Y	Q	A	I	R	G	G	E	C	S	A	A	V	V	G	G	L	N	V	L	L	K	P	N	S	S	L	.	.	.	.	.	Q	F	M	K	L	G	M	L	S	Q	D	G	T	C	R	S	F	D	A	E	G	T	G	Y	C	R	A	E
Template Known Secondary structure		S								T	T	S	T														T	S	S		S																		.	.	.	.	.					T	T		B		T	T		S			S	S	B	T	T				B		B	B
Template Predicted Secondary structure																																																	.	.	.	.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.						.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.				.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.				.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.																							.	.	.
Query SS confidence																																			.	.	.																							.	.	.
Query Sequence		G	G	G	M	V	V	V	E	E	L	E	H	A	L	A	R	G	A	H	I	Y	A	E	I	V	G	Y	G	A	T	S	D	G	.	.	.	A	D	M	V	A	P	S	G	E	G	A	V	R	C	M	K	M	A	M	H	G	V	.	.	.	D	T	P	I	D	Y	L	N	S	H	G	T	S	T	P	V	G	D	V
Query Conservation																																			.	.	.																							.	.	.
Alig confidence															.	.	.	.																	.	.	.																							.	.	.
Template Conservation															.	.	.	.
Template Sequence		A	V	V	A	V	L	L	T	K	K	S	L	A	.	.	.	.	R	R	V	Y	A	T	I	L	N	A	G	T	N	T	D	G	S	K	E	Q	G	V	T	F	P	S	G	D	V	Q	E	Q	L	I	R	S	L	Y	A	P	A	G	P	D	P	E	S	L	E	Y	I	E	A	H	G	T	G	T	K	V	G	D	P
Template Known Secondary structure											G	G	G		.	.	.	.	S			S															T	T		S	S	S												T	T	S	G	G	G	S	S		T	T	S												T	T
Template Predicted Secondary structure															.	.	.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.					240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		308	.	310	.	.	.	.	.	.	.	.	.				320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370						.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.																																																				.	.	.	.	.
Query SS confidence														.	.	.																																																				.	.	.	.	.
Query Sequence		K	E	L	A	A	I	R	E	V	F	G	D	.	.	.	K	S	P	A	I	S	A	T	K	A	M	T	G	H	S	L	G	A	A	G	V	Q	E	A	I	Y	S	L	L	M	L	E	H	G	F	I	A	P	S	I	N	I	E	E	L	D	E	Q	A	A	G	.	.	.	.	.	L	N	I	V	T	E	T	T	D
Query Conservation														.	.	.																																																				.	.	.	.	.
Alig confidence														.	.	.																																																				.	.	.	.	.
Template Conservation
Template Sequence		Q	E	L	N	G	I	V	N	A	L	C	A	T	R	R	E	P	L	L	I	G	S	T	K	S	N	M	G	H	P	E	P	A	S	G	V	A	A	L	I	K	V	L	L	S	L	E	H	G	V	W	A	P	N	L	H	Y	H	T	P	N	P	E	I	P	A	L	Q	D	G	R	L	Q	V	V	D	R	P	L	P
Template Known Secondary structure													S		S	S	S							S						B		G	G	G														T	T	T						S	S			S	B		T	T	S	S	S	S	S	S	S	S						S
Template Predicted Secondary structure
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	L	T	T	V	M	S	N	S	F	G	F	G	G	T	N	A	T	L	V	M	R	K	L	K	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	R	G	G	N	V	G	I	N	S	F	G	F	G	G	S	N	V	H	V	I	L	Q	P	N	S	R
Template Known Secondary structure				S										T	T	T
Template Predicted Secondary structure
Template SS confidence
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.