Job Description P0A953 Confidence 100.00% Date Thu Jan 5 11:09:24 GMT 2012 Rank 13 Aligned Residues 386 % Identity 23% Template c2qo3A_ PDB info PDB header:transferase Chain: A: PDB Molecule:eryaii erythromycin polyketide synthase modules 3 and 4; PDBTitle: crystal structure of [ks3][at3] didomain from module 3 of 6-2 deoxyerthronolide b synthase Resolution 2.59 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.															.	.	.	.	.	.	.	.	50	.	.	.					.	.	.	.	.	.		60	.
Predicted Secondary structure																	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.							.
Query SS confidence																	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.							.
Query Sequence		K	R	A	V	I	T	G	L	G	I	V	S	S	I	G	.	N	N	Q	Q	E	V	L	A	S	L	R	E	G	R	S	G	I	T	F	S	Q	E	L	K	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	M	R	S	H	V	W	G	N	V	K	.	.	.	.	L	D	T	T	G	L	.	I	D
Query Conservation																	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.							.
Alig confidence																	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.							.
Template Conservation
Template Sequence		D	P	I	A	I	V	S	M	A	C	R	L	P	G	G	V	N	T	P	Q	R	L	W	E	L	L	R	E	G	G	E	T	L	S	G	F	P	T	D	R	G	W	D	L	A	R	L	H	H	P	D	P	D	N	P	G	T	S	Y	V	D	K	G	G	F	L	D	D	A	A	G	F	D	A	E	F	F	G	V	S
Template Known Secondary structure														S	T	T			S										T	T									S	S	S								B		S		T	T	S	T	T		B	S					B			S		S	S								T
Template Predicted Secondary structure
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	V	V	R	F	M	S	D	A	S	I	Y	A	F	L	S	M	E	Q	A	I	A	D	A	G	L	S	P	E	A	Y	Q	N	N	P	R	V	G	L	I	A	G	S	G	G	G	S	P	R	F	Q	V	F	G	A	D	A	M	R	G	P	R	G	L	K	A	V	G	P	Y	V	V	T	K	A	M	A	S	G
Query Conservation
Alig confidence																																		.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	R	E	A	A	A	M	D	P	Q	Q	R	L	L	L	E	T	S	W	E	L	V	E	N	A	G	I	D	P	H	S	L	.	R	G	T	A	T	G	V	F	L	G	V	A	K	F	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	G	E	D	T	A	D	V	E	G	Y	S	V	T	G	V	A	P	A	V
Template Known Secondary structure							T	S																		T	T			G	G	G	G	.	T	T	B													T	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T				T	T						T	T
Template Predicted Secondary structure																																		.																	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.													.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	A	C	L	A	T	P	F	K	I	H	G	V	N	Y	S	I	S	S	A	C	A	T	S	A	H	C	I	G	N	A	V	E	Q	I	Q	L	G	K	Q	D	I	V	F	A	G	G	G	E	E	L	C	W	E	M	A	C	E	F	D	A	M	G	A	L	S	T	K	Y	N	D	T	P	E	K	A	S	R	T
Query Conservation
Alig confidence																																																													.	.	.	.	.
Template Conservation																																																													.	.	.	.	.
Template Sequence		A	S	G	R	I	S	Y	T	M	G	L	E	G	P	S	I	S	V	D	T	A	C	S	S	S	L	V	A	L	H	L	A	V	E	S	L	R	K	G	E	S	S	M	A	V	V	G	G	A	A	V	M	A	T	P	G	V	F	V	.	.	.	.	.	D	F	S	R	Q	R	A	L	A	A	D	G	R	S	K	A
Template Known Secondary structure											T	B		S								G	G	G															T	T	S		S	S										S	S	T					.	.	.	.	.				T	T	T		B		S	S					T
Template Predicted Secondary structure																																																													.	.	.	.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.						240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.			.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290				.	.	.	.	.	.
Predicted Secondary structure																																																	.	.																							.	.	.
Query SS confidence																																																	.	.																							.	.	.
Query Sequence		Y	D	A	H	R	D	G	F	V	I	A	G	G	G	G	M	V	V	V	E	E	L	E	H	A	L	A	R	G	A	H	I	Y	A	E	I	V	G	Y	G	A	T	S	D	G	A	D	.	.	M	V	A	P	S	G	E	G	A	V	R	C	M	K	M	A	M	H	G	V	D	T	.	.	.	P	I	D	Y	L	N
Query Conservation																																																	.	.																							.	.	.
Alig confidence																																																	.	.																							.	.	.
Template Conservation
Template Sequence		F	G	A	G	A	D	G	F	G	F	S	E	G	V	T	L	V	L	L	E	R	L	S	E	A	R	R	N	G	H	E	V	L	A	V	V	R	G	S	A	L	N	Q	D	G	A	S	N	G	L	S	A	P	S	G	P	A	Q	R	R	V	I	R	Q	A	L	E	S	C	G	L	E	P	G	D	V	D	A	V	E
Template Known Secondary structure		T	B	T	T				B		B	B																	T	T																	S		S	S	T	T																		T	T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.						.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.																																																				.	.
Query SS confidence																								.	.	.	.	.																																																				.	.
Query Sequence		S	H	G	T	S	T	P	V	G	D	V	K	E	L	A	A	I	R	E	V	F	G	.	.	.	.	.	D	K	S	P	A	I	S	A	T	K	A	M	T	G	H	S	L	G	A	A	G	V	Q	E	A	I	Y	S	L	L	M	L	E	H	G	F	I	A	P	S	I	N	I	E	E	L	D	E	Q	A	A	.	.
Query Conservation																								.	.	.	.	.																																																				.	.
Alig confidence																								.	.	.	.	.																																																				.	.
Template Conservation
Template Sequence		A	H	G	T	G	T	A	L	G	D	P	I	E	A	N	A	L	L	D	T	Y	G	R	D	R	D	A	D	R	P	L	W	L	G	S	V	K	S	N	I	G	H	T	Q	A	A	A	G	V	T	G	L	L	K	V	V	L	A	L	R	N	G	E	L	P	A	T	L	H	V	E	E	P	T	P	H	V	D	W	S
Template Known Secondary structure								T	T	T												T	S	S	S			T	T	S							T						B		G	G	G																T						S	S		S	S	B		T	T	S			S
Template Predicted Secondary structure
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
				370	.	.	.	.	.	.	.	.	.	380	.					.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure		.	.													.	.	.	.
Query SS confidence		.	.													.	.	.	.
Query Sequence		.	.	G	L	N	I	V	T	E	T	T	D	R	E	.	.	.	.	L	T	T	V	M	S	N	S	F	G	F	G	G	T	N	A	T	L	V	M	R	K	L	K
Query Conservation		.	.													.	.	.	.
Alig confidence		.	.													.	.	.	.
Template Conservation
Template Sequence		S	G	G	V	A	L	L	A	G	N	Q	P	W	R	R	G	E	R	T	R	R	A	A	V	S	A	F	G	I	S	G	T	N	A	H	V	I	V	E	E	A	P
Template Known Secondary structure		S	S	S					S	S						S	S	S	S											T	T	S
Template Predicted Secondary structure
Template SS confidence
		416	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.