Job Description P0A953 Confidence 100.00% Date Thu Jan 5 11:09:24 GMT 2012 Rank 11 Aligned Residues 401 % Identity 34% Template c2iwyB_ PDB info PDB header:transferase Chain: B: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] synthase; PDBTitle: human mitochondrial beta-ketoacyl acp synthase Resolution 2.06 Å

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		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.								.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure				.																																																			.	.	.	.	.	.	.
Query SS confidence				.																																																			.	.	.	.	.	.	.
Query Sequence		M	K	.	R	A	V	I	T	G	L	G	I	V	S	S	I	G	N	N	Q	Q	E	V	L	A	S	L	R	E	G	R	S	G	I	T	F	S	Q	E	L	K	D	S	G	M	R	S	H	V	W	G	N	V	.	.	.	.	.	.	.	K	L	D	T	T	G	L	I	D	R	K	V	V	R	F	M	S	D	A	S
Query Conservation				.																																																			.	.	.	.	.	.	.
Alig confidence				.																																																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	H	R	R	V	V	I	T	G	I	G	L	V	T	P	L	G	V	G	T	H	L	V	W	D	R	L	I	G	G	E	S	G	I	V	S	L	V	G	E	E	Y	K	S	I	P	C	S	V	A	A	Y	V	P	R	G	S	D	E	G	Q	F	N	E	Q	N	F	V	S	K	S	D	I	K	S	M	S	S	P	T
Template Known Secondary structure																T	T			S										T	T									S	G	G	G	T	T		S									B	S	S	S	T	T		B		G	G	G	T	S						T	T	S
Template Predicted Secondary structure
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Y	A	F	L	S	M	E	Q	A	I	A	D	A	G	L	S	P	E	A	Y	Q	N	N	P	R	V	G	L	I	A	G	S	G	G	G	S	P	R	F	Q	V	F	G	A	D	A	M	R	G	P	R	G	L	K	A	V	G	P	Y	V	V	T	K	A	M	A	S	G	V	S	A	C	L	A	T	P	F	K	I
Query Conservation
Alig confidence																																																			.
Template Conservation																																																			.
Template Sequence		I	M	A	I	G	A	A	E	L	A	M	K	D	S	G	W	H	P	Q	S	E	A	D	Q	V	A	T	G	V	A	I	G	M	G	M	I	P	L	E	V	V	S	E	T	A	L	N	F	Q	.	T	K	G	Y	N	K	V	S	P	F	F	V	P	K	I	L	V	N	M	A	A	G	Q	V	S	I	R	Y	K	L
Template Known Secondary structure																T					S						T								S																.				G	G	G	S		T	T							T	T											T
Template Predicted Secondary structure																																																			.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		H	G	V	N	Y	S	I	S	S	A	C	A	T	S	A	H	C	I	G	N	A	V	E	Q	I	Q	L	G	K	Q	D	I	V	F	A	G	G	G	E	E	L	C	W	E	M	A	C	.	E	F	D	A	M	G	A	L	S	T	K	Y	N	D	T	P	E	K	A	S	R	T	Y	D	A	H	R	D	G	F	V	I
Query Conservation																																																	.
Alig confidence																																																	.											.	.
Template Conservation																																																												.	.
Template Sequence		K	G	P	N	H	A	V	S	T	A	C	T	T	G	A	H	A	V	G	D	S	F	R	F	I	A	H	G	D	A	D	V	M	V	A	G	G	T	D	S	C	I	S	P	L	S	L	A	G	F	S	R	A	R	A	L	S	T	.	.	N	S	D	P	K	L	A	C	R	P	F	H	P	K	R	D	G	F	V	M
Template Known Secondary structure			S								G	G	G																T	S		S												S										T	T		B			.	.		S		T	T	T	S			T	T		T	T				B		B
Template Predicted Secondary structure																																																												.	.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.			.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270			.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290				.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																																									.	.																					.	.	.
Query SS confidence																																									.	.																					.	.	.
Query Sequence		A	G	G	G	G	M	V	V	V	E	E	L	E	H	A	L	A	R	G	A	H	I	Y	A	E	I	V	G	Y	G	A	T	S	D	G	A	D	M	V	.	.	A	P	S	G	E	G	A	V	R	C	M	K	M	A	M	H	G	V	D	T	.	.	.	P	I	D	Y	L	N	S	H	G	T	S	T	P	V	G	D
Query Conservation																																									.	.																					.	.	.
Alig confidence																																									.	.																					.	.	.
Template Conservation
Template Sequence		G	E	G	A	A	V	L	V	L	E	E	Y	E	H	A	V	Q	R	R	A	R	I	Y	A	E	V	L	G	Y	G	L	S	G	D	A	G	H	I	T	A	P	D	P	E	G	E	G	A	L	R	C	M	A	A	A	L	K	D	A	G	V	Q	P	E	E	I	S	Y	I	N	A	H	A	T	S	T	P	L	G	D
Template Known Secondary structure		B																	T	T																	S		S	S	S			T	T																T			G	G	G										S
Template Predicted Secondary structure
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.			.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380				.
Predicted Secondary structure																	.	.																																																												.	.	.
Query SS confidence																	.	.																																																												.	.	.
Query Sequence		V	K	E	L	A	A	I	R	E	V	F	G	D	K	S	.	.	P	A	I	S	A	T	K	A	M	T	G	H	S	L	G	A	A	G	V	Q	E	A	I	Y	S	L	L	M	L	E	H	G	F	I	A	P	S	I	N	I	E	E	L	D	E	Q	A	A	G	L	N	I	V	T	E	T	T	D	R	.	.	.	E
Query Conservation																	.	.																																																												.	.	.
Alig confidence																	.	.																																																												.	.	.
Template Conservation
Template Sequence		A	A	E	N	K	A	I	K	H	L	F	K	D	H	A	Y	A	L	A	V	S	S	T	K	G	A	T	G	H	L	L	G	A	A	G	A	V	E	A	A	F	T	T	L	A	C	Y	Y	Q	K	L	P	P	T	L	N	L	D	C	S	E	P	E	F	D	L	N	Y	V	P	L	K	A	Q	E	W	K	T	E	K
Template Known Secondary structure													G	G	G	G	G	T	S											B		G	G	G																T					B	T	T		S				T	T			S				B	S	S							S	S
Template Predicted Secondary structure
Template SS confidence
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	T	V	M	S	N	S	F	G	F	G	G	T	N	A	T	L	V	M	R	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	F	I	G	L	T	N	S	F	G	F	G	G	T	N	A	T	L	C	I	A	G	L
Template Known Secondary structure												T	T	T
Template Predicted Secondary structure
Template SS confidence
		437	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.