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Job DescriptionP0A953
Confidence99.91%DateThu Jan 5 11:09:24 GMT 2012
Rank57Aligned Residues323
% Identity15%Templatec1xetD_
PDB info PDB header:transferaseChain: D: PDB Molecule:dihydropinosylvin synthase; PDBTitle: crystal structure of stilbene synthase from pinus2 sylvestris, complexed with methylmalonyl coa
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10...... ...20...... ...30.........40.........50.........60.......
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Query Sequence  RAVITGLGIVSSIG. NNQQEVLASL. . . . . . . . . . . . . . REGRSGITFSQELKDSGMRSHVWGNVKLDTTGLIDRKVVRF
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Template Sequence  FASILAIGTANPPNAVDQSTYPDFYFRITGNEHNDKFKRICERSAIKQRYMYLTEEILKKNPDVCAFVEVPSLDARQAML
Template Known Secondary structure 



S
GGGTT




TT


S


SSSSS

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   18.20.........30.........40.........50.........60.........70.........80.........90.......
 
   68.70.........80.........90.........100.........110.........120.........130.........140.......
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Query Sequence  MSDASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLA
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Template Sequence  AMEVPRLAKEAAEKAIQEWGQSKSGITH. . . . . LIFCST. . . . . . . . . . . . . . . . . . . . . . . . . . . . TTPDLPGADFEVA
Template Known Secondary structure 
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GGG

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   102.......110.........120......... 130..... ....140........
 
   148.150.........160 .........170.........180.........190.........200.........210.........220....
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Query Sequence  TPFKIHGVNYSIS. . . SACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKASRTYDA
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Template Sequence  KLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTAVT. . . . . . . . . . . . . . . . . . . . . . FRGPSE
Template Known Secondary structure  T

TT
S

TTSTT

TTTT......................




T
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   149150.........160.........170.........180.........190.........200 ......
 
   225. ...230.........240.........250.........260.........270... ......280.
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Query Sequence  HR. . . . . DGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPS. . . . . . . . . . . . . . . . . . GEGAVRCM
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Template Sequence  THLDSLVGQALFGDGASALIVGADPIPQVEKACFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCM
Template Known Secondary structure  T
B

SS

TTT


S
TT
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TT
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   207..210.........220.........230.........240.........250.........260.........270.........280......
 
   282.......290 .........300.........310.........320...... ...330.........340.........350.....
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Query Sequence  KMAMHGVDT. . . PIDYLNSHGTSTPVGDVKELAAIREVFGDKSPAISA. . . TKAMTGHSLGAAGVQEAIYSLLMLEHGFI
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Template Sequence  VEAFSQFKISDWNKLFWVVHPGGRAILDRVE. . . . . AKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGC
Template Known Secondary structure  GGGT


GGGS

S
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TTTT
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   287..290.........300.........310....... ..320.........330.........340.........350.........360.
 
   356...360.........370.........380.........390.........400.....
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Query Sequence  APSINIEELDEQAAGLNIVTETTDRELTTVMSNSFGFGGTNATLVMRKLK
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Template Sequence  STTG. . . . . . . . . . . . . . . . . . . . EGLEMGVLFGFGPGLTIETVVLKSVP
Template Known Secondary structure  SBTT....................TT
STTT
B
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   362... ....370.........380.........390.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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