Job Description P0A953 Confidence 99.25% Date Thu Jan 5 11:09:24 GMT 2012 Rank 90 Aligned Residues 293 % Identity 16% Template c1x9eB_ PDB info PDB header:lyase Chain: B: PDB Molecule:hmg-coa synthase; PDBTitle: crystal structure of hmg-coa synthase from enterococcus2 faecalis Resolution 2.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		M	K	R	A	V	I	T	G	L	G	I	V	S	S	I	G	.	N	N	Q	Q	E	V	L	A	S	L	R	E	G	R	S	G	I	T	F	S	Q	E	L	K	D	S	G	M	R	S	H	V	W	G	N	V	K	L	D	T	T	G	L	I	D	R	K	V	V	R	F	M	S	D	A	S	I	Y	A	F	L	S	M
Query Conservation																		.
Alig confidence				.														.									.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.																							.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	T	.	I	G	I	D	K	I	S	F	F	V	P	P	Y	Y	I	D	M	T	A	L	A	E	.	.	.	.	.	A	R	N	V	D	P	G	K	F	H	I	G	I	G	Q	D	Q	M	A	V	N	P	I	S	Q	D	I	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	F	A	A	N	A	A
Template Known Secondary structure				.												S											.	.	.	.	.		T	T	S							T	T	T										T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure				.																							.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.						.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.																.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.			.	.	.
Predicted Secondary structure																																																																													.	.
Query SS confidence																																																																													.	.
Query Sequence		E	Q	A	I	A	D	A	G	L	S	P	E	A	Y	Q	N	N	P	R	V	G	L	I	A	G	S	G	G	G	S	P	R	F	Q	V	F	G	A	D	A	M	R	G	P	R	G	L	K	A	V	G	P	Y	V	V	T	K	A	M	A	S	G	V	S	A	C	L	A	T	P	F	K	I	H	G	.	.	V	N	Y
Query Conservation																																																																													.	.
Alig confidence										.	.							.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation										.	.							.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	A	I	L	T	K	E	D	.	.	K	E	A	I	D	M	.	.	.	.	.	V	I	V	G	T	E	S	S	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	S	K	A	A	A	V	V	L	H	R	L	M	G	I	Q	P	F	A	R	S	F
Template Known Secondary structure			T	T						.	.							.	.	.	.	.						S	S		S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S										T	T			S	S
Template Predicted Secondary structure										.	.							.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		60	.	.	.	.	.	.	.			.	.	70	.	.	.						.	.	.	.	.	.	80	.	.	.																												.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	S	S	A	C	A	T	S	A	H	C	I	G	N	A	V	E	Q	I	Q	L	G	K	Q	D	I	V	F	A	G	G	G	E	E	L	C	W	E	M	A	C	E	F	D	A	M	G	A	L	S	T	K	Y	N	D	T	P	E	K	A	S	R	T	Y	D	A	H	R	D	G	F	V	I	A	G	G	G	G	M
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	I	K	E	A	C	Y	G	A	T	A	G	L	Q	L	A	K	N	H	V	A	L	H	P	D	K	K	V	L	V	V	A	A	D	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	Y	G	L	N	S	G	G	E	P	T	Q	G	A	G	A	V	A
Template Known Secondary structure					S	G	G	G																S	T	T											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T		S	S	G	G	G
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140																											.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.																	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290				.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Query Sequence		V	V	V	E	E	L	E	H	A	L	A	R	G	A	H	I	Y	A	E	I	V	G	Y	G	A	T	S	D	G	A	D	M	V	A	P	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	A	V	R	C	M	K	M	A	M	H	G	V	D	T	.	.	.	P	I	D	Y	L	N	S	H
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Alig confidence							.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation							.	.	.	.	.	.
Template Sequence		M	L	V	A	S	.	.	.	.	.	.	E	P	R	I	L	A	L	K	E	D	N	V	M	L	T	Q	D	I	Y	D	F	W	R	P	T	G	H	P	Y	P	M	V	D	G	P	L	S	N	E	T	Y	I	Q	S	F	A	Q	V	W	D	E	H	K	K	R	T	G	L	D	F	A	D	Y	D	A	L	A	F	H
Template Known Secondary structure							.	.	.	.	.	.	S		S	S					S											S					T	T		S	S																															G	G	G		S
Template Predicted Secondary structure							.	.	.	.	.	.
Template SS confidence
		160	.	.	.	.							.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.								.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure																									.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.
Query Sequence		G	T	S	T	P	V	G	D	V	K	E	L	A	A	I	R	E	V	F	G	D	K	S	.	.	.	.	.	.	.	P	A	I	S	A	T	K	A	M	T	G	H	S	L	G	A	A	G	V	Q	E	A	I	Y	S	L	L	M	L	E	H	G	F	I	A	P	S	I	N	I	E	E	L	D	E	Q	A	A	G	L
Query Conservation																									.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	P	Y	T	K	M	G	K	K	A	L	L	A	K	I	S	D	Q	T	E	A	E	Q	E	R	I	L	A	R	Y	E	E	S	I	I	Y	S	R	R	V	G	N	L	Y	T	G	S	L	Y	L	G	L	I	S	L	L	E	N	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S	S												S	T	T	S																T	T	T	G	G	G	T				G	G	G														T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.				.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.
Query SS confidence																										.	.	.
Query Sequence		N	I	V	T	E	T	T	D	R	E	L	T	T	V	M	S	N	S	F	G	F	G	G	T	.	.	.	N	A	T	L	V	M	R	K	L	K	D
Query Conservation																										.	.	.
Alig confidence		.	.	.	.	.	.																			.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	T	L	T	A	G	N	Q	I	G	L	F	S	Y	G	S	G	A	V	A	E	F	F	T	G	E	L	V	A	G	Y	Q	N
Template Known Secondary structure		.	.	.	.	.	.	T			T	T										T	T	T											T	T	G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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