Return to main results Retrieve Phyre Job Id

Job DescriptionP0A953
Confidence99.95%DateThu Jan 5 11:09:24 GMT 2012
Rank51Aligned Residues266
% Identity22%Templatec1wl5A_
PDB info PDB header:transferaseChain: A: PDB Molecule:acetyl-coenzyme a acetyltransferase 2; PDBTitle: human cytosolic acetoacetyl-coa thiolase
Resolution2.26 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   71........80.........90.........100.........110.........120.........130.........140.........150
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  ASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPF
Query Conservation     
 
 

 


 



           

  
                                   
  
  

   
Alig confidence 
























.....









...........................












Template Conservation    


  
   

 



    

 .....
         ...........................     
   
   
Template Sequence  VQDLGSTVIKEVLKRATVAPEDVSE. . . . . VIFGHVLAAG. . . . . . . . . . . . . . . . . . . . . . . . . . . CGQNPVRQASVGA
Template Known Secondary structure  T

GGG

.....
S

TT...........................S
S
T
Template Predicted Secondary structure 





.....




...........................




Template SS confidence 















































































   30.........40.........50.... .....60.... .....70.......
 
   151... .....160.........170.........180.........190...
Predicted Secondary structure 



.



















....................................
Query SS confidence 



.






































. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  KIHG. VNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEEL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation 

 
.   

  

 
 
 

  
   
  
  
  



 
  ....................................
Alig confidence 



.






































....................................
Template Conservation 

             
   
   
   
  
    


 
 
  
                                   
Template Sequence  GIPYSVPAWSCQMIGSGLKAVCLAVQSIGIGDSSIVVAGGMENMSKAPHLAYLRTGVKIGEMPLTDSILCDGLTDAFHNC
Template Known Secondary structure  T

TTS




TS
SSTT




SS

SSS



TTTTTT
Template Predicted Secondary structure 


























































Template SS confidence 















































































   78.80.........90.........100.........110.........120.........130.........140.........150.......
 
   194.....200...... ...210.....
Predicted Secondary structure  ..

........................................................





Query SS confidence  . .












. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .








Query Sequence  . . CWEMACEFDAMGA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LSTKYNDTP
Query Conservation  ..             ........................................................
        
Alig confidence  ..












........................................................








Template Conservation       
       
 
 
     
      
                             
   
     
         
Template Sequence  HMGITAENVAKKWQVSREDQDKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRKGLIEVKTDEFPRHGSNIEAMSKLKPYF
Template Known Secondary structure  TT

TTTTTTTB

TT
S
S


TT

TS

SS
Template Predicted Secondary structure 






























Template SS confidence 















































































   159160.........170.........180.........190.........200.........210.........220.........230........
 
   216...220.........230.........240.........250.........260.........270.........280.........290 ..
Predicted Secondary structure 































...

Query SS confidence 










































































. . .

Query Sequence  EKASRTYDAHRDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPSGEGAVRCMKMAMHGVDT. . . PI
Query Conservation      



    
   



  



    
  

  
 
 
 
     
      
       
   

  
  ...

Alig confidence 






















































...
















...

Template Conservation                   




 

 
   
  

  
   
 
           ...      
   

  


   

Template Sequence  LTDGTGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGVEPSIM. . . GIGPIPAIKQAVTKAGWSLEDV
Template Known Secondary structure 
TTTT



GGGB


T


S

GGGG...GGTT

GGG
Template Predicted Secondary structure 




























...






Template SS confidence 















































































   239240.........250.........260.........270.........280.........290... ......300.........310.....
 
   293......300.........310...... ...320.. .......330.........340.........350.........360.........370
Predicted Secondary structure 




.




.


























Query SS confidence 























.





.















































Query Sequence  DYLNSHGTSTPVGDVKELAAIREV. FGDKSP. AISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAG
Query Conservation 
 
  




   
  
  

   .

    . 
 
 
   

   


   
    
 
  
 


             
Alig confidence 










....








.





.






.





















..................
Template Conservation 
  
 

 
  ....      
 


    

  

   . 


 



   
 
   


 ..................
Template Sequence  DIFEINEAFAA. . . . VSAAIVKELGLNPEKVNIEGGAIA. LGHPLGASGCRILVTLLHTLER. . . . . . . . . . . . . . . . . .
Template Known Secondary structure 


SB....T

GGGBSTT

.


..................
Template Predicted Secondary structure 




....












.

..................
Template SS confidence 















































































   316...320...... ...330.........340.........350 .........360.........370..
 
   371........380.........390.........400...
Predicted Secondary structure 

















Query SS confidence 
































Query Sequence  LNIVTETTDRELTTVMSNSFGFGGTNATLVMRK
Query Conservation    
            
  
 
 

 
  


  
Alig confidence  .........























Template Conservation  .........  
   
     


 
 
  


Template Sequence  . . . . . . . . . MGRSRGVAALCIGGGMGIAMCVQR
Template Known Secondary structure  .........T

TTT
Template Predicted Secondary structure  .........







Template SS confidence 
































   373......380.........390......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions