Job Description P0A953 Confidence 99.63% Date Thu Jan 5 11:09:24 GMT 2012 Rank 76 Aligned Residues 254 % Identity 18% Template c1u0mA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:putative polyketide synthase; PDBTitle: crystal structure of 1,3,6,8-tetrahydroxynaphthalene synthase (thns)2 from streptomyces coelicolor a3(2): a bacterial type iii polyketide3 synthase (pks) provides insights into enzymatic control of reactive4 polyketide intermediates Resolution 2.22 Å

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	V	V	R	F	M	S	D	A	S	I	Y	A	F	L	S	M	E	Q	A	I	A	D	A	G	L	S	P	E	A	Y	Q	N	N	P	R	V	G	L	I	A	G	S	G	G	G	S	P	R	F	Q	V	F	G	A	D	A	M	R	G	P	R	G	L	K	A	V	G	P	Y	V	V	T	K	A	M	A	S	G
Query Conservation
Alig confidence																																				.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	R	N	K	V	Y	E	R	E	A	K	S	R	V	P	A	V	I	Q	R	A	L	D	D	A	E	L	L	A	T	D	I	D	V	.	.	.	.	.	I	I	Y	V	S	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	F	M	M	P	S
Template Known Secondary structure																											T			G	G	G		S		.	.	.	.	.						S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S			S	S
Template Predicted Secondary structure																																				.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100						.	.	.	.	.	.																													.	.	.	110	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160				.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.
Query SS confidence																					.	.	.
Query Sequence		V	S	A	C	L	A	T	P	F	K	I	H	G	V	N	Y	S	I	S	.	.	.	S	A	C	A	T	S	A	H	C	I	G	N	A	V	E	Q	I	Q	L	G	K	Q	D	I	V	F	A	G	G	G	E	E	L	C	W	E	M	A	C	E	F	D	A	M	G	A	L	S	T	K	Y	N	D	T	P	E	K	A
Query Conservation																					.	.	.
Alig confidence																					.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	A	W	L	I	N	E	M	G	F	D	S	T	T	R	Q	I	P	I	A	Q	L	G	C	A	A	G	G	A	A	I	N	R	A	H	D	F	C	T	A	Y	P	E	A	N	A	L	I	V	A	C	E	F	C	S	L	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										T	T			T	T								S		G	G	G																S	T	T											G	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		219	220	.	.	.	.	.	.	.	.	.	230					.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.													250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure														.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	R	T	Y	D	A	H	R	D	G	F	V	.	.	.	.	I	A	G	G	G	G	M	V	V	V	E	E	L	E	H	A	L	A	R	.	.	.	.	.	.	.	.	.	.	.	.	G	A	H	I	Y	A	E	I	V	G	Y	G	A	T	S	D	G	A	D	M	V	A	P	S	G	E	G	A	V	R	C	M	K
Query Conservation														.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	Q	P	T	D	L	G	V	G	S	L	L	C	N	G	L	F	G	D	G	I	A	A	A	V	V	R	G	R	G	G	T	G	V	R	L	E	R	N	G	S	Y	L	I	P	K	T	E	D	W	I	M	Y	D	V	K	A	T	G	F	H	F	L	L	D	K	R	V	P	A	T	M	E	P	L	A	P	A	L	K
Template Known Secondary structure				T	T			S										B											T	T	T		S													S	S		T	T	T							T	T								T	T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		283	.	.	.	.	.	.	290				.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.				.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure										.	.	.																																										.	.	.
Query SS confidence										.	.	.																																										.	.	.
Query Sequence		M	A	M	H	G	V	D	T	.	.	.	P	I	D	Y	L	N	S	H	G	T	S	T	P	V	G	D	V	K	E	L	A	A	I	R	E	V	F	G	D	K	S	P	A	I	S	A	T	K	A	M	T	.	.	.	G	H	S	L	G	A	A	G	V	Q	E	A	I	Y	S	L	L	M	L	E	H	G	F	I	A
Query Conservation										.	.	.																																										.	.	.
Alig confidence										.	.	.																				.	.	.	.	.																		.	.	.																	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.																																					.	.	.	.	.	.	.	.	.
Template Sequence		E	L	A	G	E	H	G	W	D	A	S	D	L	D	F	Y	I	V	H	A	G	G	P	R	I	L	D	D	L	S	.	.	.	.	.	T	F	L	E	V	D	P	H	A	F	R	F	S	R	A	T	L	T	E	Y	G	N	I	A	S	A	V	V	L	D	A	L	R	R	L	F	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						T	T	S			S	S			S							S										.	.	.	.	.			S		S		G	G	G	G										T		B		T	T												.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																.	.	.	.	.																																					.	.	.	.	.	.	.	.	.
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.						.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	I	N	I	E	E	L	D	E	Q	A	A	G	L	N	I	V	T	E	T	T	D	R	E	L	T	T	V	M	S	N	S	F	G	F	G	G	T	N	A	T	L	V	M	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	G	G	V	E	E	G	A	R	G	L	L	A	G	F	G	P	G	I	T	A	E	M	S	L	G	C
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S					S	S										T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																				318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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