Job Description P0A953 Confidence 100.00% Date Thu Jan 5 11:09:24 GMT 2012 Rank 5 Aligned Residues 401 % Identity 35% Template c1e5mA_ PDB info PDB header:condensing enzyme Chain: A: PDB Molecule:beta ketoacyl acyl carrier protein synthase ii; PDBTitle: beta ketoacyl acyl carrier protein synthase ii (kasii) from2 synechocystis sp. Resolution 1.54 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		K	R	A	V	I	T	G	L	G	I	V	S	S	I	G	N	N	Q	Q	E	V	L	A	S	L	R	E	G	R	S	G	I	T	F	S	Q	E	L	K	D	S	G	M	R	S	H	V	W	G	N	V	.	K	L	D	T	T	G	L	I	D	R	K	V	V	R	F	M	S	D	A	S	I	Y	A	F	L	S	M	E
Query Conservation																																																					.
Alig confidence																																																					.
Template Conservation
Template Sequence		K	R	V	V	V	T	G	L	G	A	I	T	P	I	G	N	T	L	Q	D	Y	W	Q	G	L	M	E	G	R	N	G	I	G	P	I	T	R	F	D	A	S	D	Q	A	C	R	F	G	G	E	V	K	D	F	D	A	T	Q	F	L	D	R	K	E	A	K	R	M	D	R	F	C	H	F	A	V	C	A	S	Q
Template Known Secondary structure													B	T	T	B	S	S										T	T									S	S			T	T	S	S									S			G	G	G	T	S							T	S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	I	A	D	A	G	L	S	P	E	A	Y	Q	N	N	P	R	V	G	L	I	A	G	S	G	G	G	S	P	R	F	Q	V	F	G	A	D	A	M	R	G	P	R	G	L	K	A	V	G	P	Y	V	V	T	K	A	M	A	S	G	V	S	A	C	L	A	T	P	F	K	I	H	G	V	N	Y	S	I	S
Query Conservation
Alig confidence															.																												.
Template Conservation															.																												.
Template Sequence		Q	A	I	N	D	A	K	L	V	I	N	E	L	.	N	A	D	E	I	G	V	L	I	G	T	G	I	G	G	L	K	V	L	E	D	Q	Q	T	I	L	L	.	D	K	G	P	S	R	C	S	P	F	M	I	P	M	M	I	A	N	M	A	S	G	L	T	A	I	N	L	G	A	K	G	P	N	N	C	T	V
Template Known Secondary structure								T					T	T	.	T	G	G	G								S	S		S													.				G	G	G	S		T	T						S	T	T											T			S
Template Predicted Secondary structure															.																												.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		S	A	C	A	T	S	A	H	C	I	G	N	A	V	E	Q	I	Q	L	G	K	Q	D	I	V	F	A	G	G	G	E	E	L	C	W	E	M	A	C	.	E	F	D	A	M	G	A	L	S	T	K	Y	N	D	T	P	E	K	A	S	R	T	Y	D	A	H	R	D	G	F	V	I	A	G	G	G	G	M	V	V
Query Conservation																																									.
Alig confidence																																									.												.
Template Conservation																																																					.
Template Sequence		T	A	C	A	A	G	S	N	A	I	G	D	A	F	R	L	V	Q	N	G	Y	A	K	A	M	I	C	G	G	T	E	A	A	I	T	P	L	S	Y	A	G	F	A	S	A	R	A	L	S	F	R	.	N	D	D	P	L	H	A	S	R	P	F	D	K	D	R	D	G	F	V	M	G	E	G	S	G	I	L	I
Template Known Secondary structure			G	G	G															T	T	S		S												S										T	T		B				.	T	T		G	G	G	T			T	T	B	T	T			S	B		B	B
Template Predicted Secondary structure																																																					.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.			.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.				.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																															.	.																					.	.	.
Query SS confidence																															.	.																					.	.	.
Query Sequence		V	E	E	L	E	H	A	L	A	R	G	A	H	I	Y	A	E	I	V	G	Y	G	A	T	S	D	G	A	D	.	.	M	V	A	P	S	G	E	G	A	V	R	C	M	K	M	A	M	H	G	V	.	.	.	D	T	P	I	D	Y	L	N	S	H	G	T	S	T	P	V	G	D	V	K	E	L	A	A	I	R
Query Conservation																															.	.																					.	.	.
Alig confidence																															.	.																					.	.	.
Template Conservation
Template Sequence		L	E	E	L	E	S	A	L	A	R	G	A	K	I	Y	G	E	M	V	G	Y	A	M	T	C	D	A	Y	H	I	T	A	P	V	P	D	G	R	G	A	T	R	A	I	A	W	A	L	K	D	S	G	L	K	P	E	M	V	S	Y	I	N	A	H	G	T	S	T	P	A	N	D	V	T	E	T	R	A	I	K
Template Known Secondary structure											T	T																	S		S	S	S			T	T																T			G	G	G										S
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		315	.	.	.	.	320	.			.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		E	V	F	G	D	K	S	.	.	P	A	I	S	A	T	K	A	M	T	G	H	S	L	G	A	A	G	V	Q	E	A	I	Y	S	L	L	M	L	E	H	G	F	I	A	P	S	I	N	I	E	E	L	D	E	Q	A	A	G	L	N	I	V	T	E	T	T	D	R	E	L	T	T	V	M	S	N	S	F	G	F
Query Conservation									.	.
Alig confidence									.	.
Template Conservation
Template Sequence		Q	A	L	G	N	H	A	Y	N	I	A	V	S	S	T	K	S	M	T	G	H	L	L	G	G	S	G	G	I	E	A	V	A	T	V	M	A	I	A	E	D	K	V	P	P	T	I	N	L	E	N	P	D	P	E	C	D	L	D	Y	V	P	G	Q	S	R	A	L	I	V	D	V	A	L	S	N	S	F	G	F
Template Known Secondary structure					G	G	G	G	G	G	S					T						B		G	G	G																T					B	T	T		S	S	B		T	T			S				B	S	S							S									T
Template Predicted Secondary structure
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
		393	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	T	N	A	T	L	V	M	R	K	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	H	N	V	T	L	A	F	K	K	Y	Q
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		404	.	.	.	.	.	410	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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