Job Description P68183 Confidence 100.00% Date Thu Jan 5 12:10:56 GMT 2012 Rank 7 Aligned Residues 240 % Identity 23% Template c3d31D_ PDB info PDB header:transport protein Chain: D: PDB Molecule:sulfate/molybdate abc transporter, permease PDBTitle: modbc from methanosarcina acetivorans Resolution 3.00 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	I	T	H	L	L	L	L	L	F	I	A	A	I	M	F	P	L	L	M	V	V	A	I	S	L	R	Q	G	N	F	A	T	G	S	L	I	P	E	Q	I	S	W	D	H	W	K	L	A	L	G	F	S	V	E	Q	A	D	G	R	I	T	P	P	P	F	P	V	L	L	W	L	W	N	S	V	K	V	A
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	F	V	F	S	F	L	L	L	V	L	F	L	F	I	F	L	T	L	S	N	M	I	F	E	Q	I	T	E	.	.	.	.	.	.	.	.	.	.	.	.	.	D	F	S	G	L	V	K	A	A	G	N	R	S	V	I	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	I	F	L	S	L	Y	A	G
Template Known Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	T																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.														.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60														.	.	.	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.							.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.
Query Sequence		G	I	S	A	I	G	I	V	A	L	S	T	T	C	A	Y	A	F	A	R	M	R	F	P	G	K	A	T	L	L	K	G	M	L	I	F	Q	M	F	P	A	V	L	S	L	V	A	L	Y	A	L	F	D	R	L	G	E	Y	I	P	.	.	.	.	.	.	F	I	G	L	N	T	H	G	G	V	I	F	A	Y
Query Conservation																																																														.	.	.	.	.	.
Alig confidence																																																														.	.	.	.	.	.
Template Conservation
Template Sequence		F	L	A	T	L	L	A	L	L	L	G	A	P	T	G	Y	I	L	A	R	F	D	F	P	G	K	R	L	V	E	S	I	I	D	V	P	V	V	V	P	H	T	V	A	G	I	A	L	L	T	V	F	G	S	R	G	L	I	G	E	P	L	E	S	Y	I	Q	F	R	D	A	L	P	G	I	V	V	A	M	L
Template Known Secondary structure																				T	T				T	T										G	G	G	T	S														S	T	T	S	T	T	T	G	G	G	T	T	T				T	T	S
Template Predicted Secondary structure
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	G	I	A	L	H	V	W	T	I	K	G	Y	F	E	T	I	D	S	S	L	E	E	A	A	A	L	D	G	A	T	P	W	Q	A	F	R	L	V	L	L	P	L	S	V	P	I	L	A	V	V	F	I	L	S	F	I	A	A	I	T	E	V	P	V	A	S	L	L	L	R	D	V	N	S	Y	T	L	A
Query Conservation
Alig confidence																																																																														.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		F	V	S	M	P	Y	L	A	N	S	A	R	E	G	F	K	S	V	D	P	R	L	E	N	A	A	R	S	L	G	A	P	L	W	K	A	F	F	F	V	T	L	P	L	S	A	R	Y	L	L	I	G	S	V	M	T	W	A	R	A	I	S	E	F	G	A	V	V	I	L	A	Y	Y	P	M	V	.	.	.	.
Template Known Secondary structure																			S											T	T										T																						T											T	T			.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	M	Q	Q	Y	L	N	P	Q	N	Y	L	W	G	D	F	A	A	A	A	V	M	S	A	L	P	I	T	I	V	F	L	L	A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	P	T	L	I	Y	D	R	F	I	S	Y	G	L	S	A	S	R	P	I	A	V	L	L	I	L	V	T	L	S	I	F	L	V	I	R
Template Known Secondary structure													S	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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