Return to main results Retrieve Phyre Job Id

Job DescriptionP68183
Confidence1.21%DateThu Jan 5 12:10:56 GMT 2012
Rank92Aligned Residues31
% Identity16%Templatec2jagA_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:halorhodopsin; PDBTitle: l1-intermediate of halorhodopsin t203v
Resolution1.93 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.....
Predicted Secondary structure 

Query SS confidence 






























Query Sequence  QPKSQKARLFITHLLLLLFIAAIMFPLLMVV
Query Conservation    
       
    
       
 
    
Alig confidence 






























Template Conservation   
           
     
 
  


 
 
Template Sequence  SASSAGTAEIFDTLRVLVVVLWLGYPIVWAV
Template Known Secondary structure  TT
Template Predicted Secondary structure 



Template SS confidence 






























   186...190.........200.........210......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions