Job Description P37342 Confidence 5.49% Date Thu Jan 5 11:55:22 GMT 2012 Rank 98 Aligned Residues 35 % Identity 11% Template c3cwzB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:rab6-interacting protein 1; PDBTitle: strucure of rab6(gtp)-r6ip1 complex Resolution 3.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		124	.	.	.	.	.	130	.	.					.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.
Query SS confidence											.	.	.	.
Query Sequence		A	L	L	Q	P	Y	V	R	I	.	.	.	.	L	T	Q	D	E	I	D	V	R	I	K	R	F	W	R	Y	L	D	R	T	L	P	D	A	F	M	H
Query Conservation											.	.	.	.
Alig confidence											.	.	.	.																.
Template Conservation																														.
Template Sequence		E	L	T	K	K	L	Y	K	R	Y	A	F	L	R	C	D	D	E	K	E	Q	F	L	Y	H	L	L	S	.	F	N	A	V	D	Y	F	C	F	T	N
Template Known Secondary structure								B		T	T	S	T	T	T													G	G	.	G	G	S	S				T	T	T	T
Template Predicted Secondary structure																														.
Template SS confidence
		885	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.		.	.	.	.	.	.	.	920	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions