Phyre 2 alignment of P37342 with c1sjiA

Job Description P37342
Confidence 7.90% Date Thu Jan 5 11:55:22 GMT 2012

Rank 65 Aligned Residues 39

% Identity 18% Template c1sjiA_

PDB info PDB header:metal binding protein Chain: A: PDB Molecule:calsequestrin, cardiac muscle isoform; PDBTitle: comparing skeletal and cardiac calsequestrin structures and2 their calcium binding: a proposed mechanism for coupled3 calcium binding and protein polymerization

Resolution 2.40 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence	H	A	P	Y	K	P	R	Y	V	L	P	D	Y	A	R	F	L	A	N	G	S	E	W	L	E	L	E	G	A	K	D	L	D	D	A	L	S	L	L	T	I	L	Y	H	H	V	P	S	V	T	S	M	.	P	V	Y	L	G	Q	L	D
Query Conservation																																																					.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	Y	H	E	S	V	S	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	V	A	Q	K	Q	F	Q	L	K	E	I	V	L	E	L	V	A	Q	V	L	E	H	K	D	I	G	F	V	M	V	D
Template Known Secondary structure					S		S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T	S																	G	G	G	S	S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	37	.	.	40	.	.	.	.																						.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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