Job Description P76340 Confidence 41.63% Date Thu Jan 5 12:21:57 GMT 2012 Rank 268 Aligned Residues 63 % Identity 16% Template d2d1ha1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain TrmB-like Resolution 2.05

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		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	R	K	E	F	Q	L	L	W	L	L	A	S	R	A	G	E	I	I	P	R	T	V	I	A	S	E	I	W	G	I	N	F	D	S	D	T	N	T	V	D	V	A	I	R	R	L	R	A	K	V	D	D	P	F	P	E	K	L	I	A	T	I	R	G	M	G	Y	S	F	V	A	V	K	K
Query Conservation
Alig confidence																				.											.	.	.	.	.																			.	.	.	.	.	.	.
Template Conservation																				.											.	.	.	.	.																			.	.	.	.	.	.	.
Template Sequence		I	T	D	T	D	V	A	V	L	L	K	X	V	E	I	E	K	P	.	I	T	S	E	E	L	A	D	I	F	.	.	.	.	.	K	L	S	K	T	T	V	E	N	S	L	K	K	L	I	E	L	G	.	.	.	.	.	.	.	L	V	V	R	T	K	T	P	K	Y	Y	Y	S	I	S	S	N
Template Known Secondary structure																		S		.											.	.	.	.	.	T																T	T	.	.	.	.	.	.	.	S															T	T
Template Predicted Secondary structure																				.											.	.	.	.	.																			.	.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.						.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.								.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions