Return to main results Retrieve Phyre Job Id

Job DescriptionP76340
Confidence31.11%DateThu Jan 5 12:21:57 GMT 2012
Rank314Aligned Residues48
% Identity21%Templated1sfxa_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain TrmB-like
Resolution1.55

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   144.....150.........160.........170.........180.........190........
Predicted Secondary structure 


















Query SS confidence 






















































Query Sequence  ISITLTRKEFQLLWLLASRAGEIIPRTVIASEIWGINFDSDTNTVDVAIRRLRAK
Query Conservation      

  
  

  
        

  
   
          

   
 


 
Alig confidence 




















..









.....
















Template Conservation     


     

  
     .. 
  


   ..... 
    

  
  
   
Template Sequence  EKLSFKPSDVRIYSLLLERGG. . XRVSEIAREL. . . . . DLSARFVRDRLKVLLKR
Template Known Secondary structure  T




..B
.....T

T
Template Predicted Secondary structure 








..

.....





Template SS confidence 






















































   13......20.........30... ......40... ......50.........60
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions