Job Description P76340 Confidence 32.99% Date Thu Jan 5 12:21:57 GMT 2012 Rank 299 Aligned Residues 68 % Identity 16% Template d1sd4a_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Penicillinase repressor Resolution 2.00

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		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	T	L	T	R	K	E	F	Q	L	L	W	L	L	A	S	R	A	G	E	I	I	P	R	T	V	I	A	S	E	I	W	G	I	N	F	D	S	D	T	N	T	V	D	V	A	I	R	R	L	R	A	K	V	D	D	P	F	P	E	K	L	I	A	T	I	R	G	M	G	Y	S	F	V	A	V
Query Conservation
Alig confidence																					.	.														.																					.	.	.	.	.	.
Template Conservation																					.	.														.																					.	.	.	.	.	.
Template Sequence		Q	V	E	I	S	X	A	E	W	D	V	X	N	I	I	W	D	K	K	.	.	S	V	S	A	N	E	I	V	V	E	I	Q	K	.	Y	K	E	V	S	D	K	T	I	R	T	L	I	T	R	L	Y	K	K	E	.	.	.	.	.	.	I	I	K	R	Y	K	S	E	N	I	Y	F	Y	S	S	N
Template Known Secondary structure																			S	S	.	.	S												T	.	T	S																	T	T	.	.	.	.	.	.	S							T	T
Template Predicted Secondary structure																					.	.														.																					.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.							.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions