Job Description P76340 Confidence 88.67% Date Thu Jan 5 12:21:57 GMT 2012 Rank 163 Aligned Residues 166 % Identity 10% Template c3n75E_ PDB info PDB header:lyase Chain: E: PDB Molecule:lysine decarboxylase, inducible; PDBTitle: x-ray crystal structure of the escherichia coli inducible lysine2 decarboxylase ldci Resolution 2.00 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.																																					.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.																																					.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	E	W	V	T	Q	G	L	S	E	A	G	Y	V	I	D	A	V	S	D	G	R	D	G	L	Y	L	A	L	K	D	.	D	Y	A	L	I	I	L	D	I	M	L	P	G	M	D	G	W	Q	I	L	Q	T	L	R	T	A	K	Q	T	P	V	I	C	L	T	A	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																	.																																					.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.																								.	.												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.
Template Sequence		I	R	E	L	H	R	A	L	E	R	L	N	F	Q	I	V	Y	P	N	D	R	D	D	L	L	K	L	I	E	N	N	A	R	L	C	G	V	I	F	D	W	D	K	Y	N	L	E	L	C	E	E	I	S	K	M	.	.	N	E	N	L	P	L	Y	A	F	A	N	T	Y	S	T	L	D	V	S	L	N	D	L
Template Known Secondary structure												T	T							S	S												T	T																							.	.		T	T									T	T					G	G	G	T	T	S
Template Predicted Secondary structure																																																									.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
												80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100				.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																						.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																						.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	R	D	S	V	D	D	R	V	R	G	L	D	S	G	A	N	D	Y	L	V	K	.	.	.	P	F	S	F	S	E	L	L	A	R	V	R	A	Q	L	R	Q	H	H	A	L	N	S	T	L	E	I	S	G	L	R	M	D	S	V	S	H	S	V	S	R	D	N	I	S	I
Query Conservation		.	.	.	.	.	.	.	.	.	.																						.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																						.	.	.
Template Conservation
Template Sequence		R	L	Q	I	S	F	F	E	Y	A	L	G	A	A	E	D	I	A	N	K	I	K	Q	T	T	D	E	Y	I	N	T	I	L	P	P	L	T	K	A	L	F	K	Y	V	R	E	G	K	Y	T	F	C	T	P	G	H	M	G	G	T	A	F	Q	K	S	P	V	G	S	L	F	Y	D	F	F	G	P	N	T	M
Template Known Secondary structure												T	T																					S																		S		S	S	T	T	T	T	T					T	S
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		147	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		T	L	T	R	K	.	E	F	Q	L	L	W	L	L	A	S	R	A	G	E	I	I	P	R	T	V	I	A	S	E	I	W	G	I	N
Query Conservation							.
Alig confidence							.
Template Conservation
Template Sequence		K	S	D	I	S	I	S	V	S	E	L	G	S	L	L	D	H	S	G	P	H	K	E	A	E	Q	Y	I	A	R	V	F	N	A	D
Template Known Secondary structure			T				T	T	S	G	G	G		B	T	T	T	T	B	T														T		S
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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