Return to main results Retrieve Phyre Job Id

Job DescriptionP76340
Confidence99.73%DateThu Jan 5 12:21:57 GMT 2012
Rank88Aligned Residues117
% Identity27%Templatec3khtA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:response regulator; PDBTitle: crystal structure of response regulator from hahella chejuensis
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20..... ....30.........40.........50.........60.........70. .....
Predicted Secondary structure 





..


















...




Query SS confidence 























. .













































. . .




Query Sequence  KILLIEDNQRTQEWVTQGLSEAGY. . VIDAVSDGRDGLYLALKDDYALIILDIMLPGMDGWQILQTLRTAKQ. . . TPVIC
Query Conservation 







      
   
   
 .. 
  
    


        



 
       
            ...  

 
Alig confidence 























..













































...




Template Conservation 






           
   
    
  
    


  
     



 
  

   
      

       
 

 
Template Sequence  RVLVVEDNPDDIALIRRVLDRKDIHCQLEFVDNGAKALYQVQQAKYDLIILDIGLPIANGFEVXSAVRKPGANQHTPIVI
Template Known Secondary structure 


TT

SSTT


S
TT
GGG
SSSTTTT

Template Predicted Secondary structure 





























Template SS confidence 















































































   16...20.........30.........40.........50.........60.........70.........80.........90.....
 
   77..80.........90.........100.... .....110........
Predicted Secondary structure 















.













Query SS confidence 



























.













Query Sequence  LTARDSVDDRVRGLDSGANDYLVKPFSF. SELLARVRAQLRQH
Query Conservation                         
    .              
Alig confidence 



























.













Template Conservation   
              
    
 

      
   
   
   
Template Sequence  LTDNVSDDRAKQCXAAGASSVVDKSSNNVTDFYGRIYAIFSYW
Template Known Secondary structure  TT

TT
S

TTS
Template Predicted Secondary structure 












Template SS confidence 










































   96...100.........110.........120.........130........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions