Job Description P76340 Confidence 92.69% Date Thu Jan 5 12:21:57 GMT 2012 Rank 156 Aligned Residues 58 % Identity 12% Template c3k69A_ PDB info PDB header:transcription Chain: A: PDB Molecule:putative transcription regulator; PDBTitle: crystal structure of a putative transcriptional regulator (lp_0360)2 from lactobacillus plantarum at 1.95 a resolution Resolution 1.95 Å

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		149	150	.	.	.	.	.					.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.			.	.	.	.
Predicted Secondary structure									.	.	.	.																																																												.	.
Query SS confidence									.	.	.	.																																																												.	.
Query Sequence		T	R	K	E	F	Q	L	.	.	.	.	L	W	L	L	A	S	R	A	G	E	I	I	P	R	T	V	I	A	S	E	I	W	G	I	N	F	D	S	D	T	N	T	V	D	V	A	I	R	R	L	R	A	K	V	D	D	P	F	P	E	K	L	I	A	T	I	R	G	M	.	.	G	Y	S	F
Query Conservation									.	.	.	.																																																												.	.
Alig confidence									.	.	.	.																						.	.	.	.	.																			.	.	.	.	.	.	.									.	.
Template Conservation																																		.	.	.	.	.																			.	.	.	.	.	.	.
Template Sequence		X	K	L	D	F	S	V	A	V	H	S	I	L	Y	L	D	A	H	R	D	S	K	V	A	S	R	E	L	A	Q	S	L	.	.	.	.	.	H	L	N	P	V	X	I	R	N	I	L	S	V	L	H	K	H	G	.	.	.	.	.	.	.	Y	L	T	G	T	V	G	K	N	G	G	Y	Q	L
Template Known Secondary structure			T															T	T	T	T	S		B										.	.	.	.	.	T	S		G	G	G	T										T	T	.	.	.	.	.	.	.	S	S					S	T	T
Template Predicted Secondary structure																																		.	.	.	.	.																			.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.						.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.								.	.	.	.	60	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions