Job Description P76340 Confidence 31.40% Date Thu Jan 5 12:21:57 GMT 2012 Rank 311 Aligned Residues 79 % Identity 11% Template c3dmdA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:signal recognition particle receptor; PDBTitle: structures and conformations in solution of the signal recognition2 particle receptor from the archaeon pyrococcus furiosus Resolution 2.21 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.								.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.						.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																					.	.	.	.	.	.	.																																					.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.																																					.	.	.	.	.
Query Sequence		E	W	V	T	Q	G	L	S	E	A	G	Y	V	I	D	A	V	S	D	.	.	.	.	.	.	.	G	R	D	G	L	Y	L	A	L	K	D	D	Y	A	L	I	I	L	D	I	M	L	P	G	M	D	G	W	Q	I	L	Q	T	L	R	T	.	.	.	.	.	A	K	Q	T	P	V	I	C	L	T	A	R	D
Query Conservation																					.	.	.	.	.	.	.																																					.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.																																					.	.	.	.	.
Template Conservation
Template Sequence		E	Q	L	E	E	H	A	K	R	I	G	V	K	V	I	K	H	S	Y	G	A	D	P	A	A	V	A	Y	D	A	I	Q	H	A	K	A	R	G	I	D	V	V	L	I	D	T	A	G	R	S	E	T	N	R	N	L	M	D	E	M	K	K	I	A	R	V	T	K	P	N	L	V	I	F	V	G	D	A	L	A
Template Known Secondary structure											T	T							S	T	T																		T		S								S	S			S	S	S																S								T	T
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	D	D	R	V	R	G	L	D	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	N	A	I	V	E	Q	A	R	Q	F
Template Known Secondary structure		T	T	T
Template Predicted Secondary structure
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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